RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CNTD2Q9H8S5 307 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 SEBOXQ9HB31 216 aaPredicted RBP9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 HES4Q9HCC6 221 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 TXNL4BQ9NX01 149 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 KAAG1Q9UBP8 84 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 MRPS28Q9Y2Q9 187 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 DYSFO75923 2080 aa9.95□□□□□ -0.82
SPTLC1-202ENST00000337841 TEX15Q9BXT5 2789 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 IGKV1-12A0A0C4DH73 117 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 LOC100506127A0A0U1RQW1 187 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 RFPL4AA6NLU0 287 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 F5H0A9 414 aaPredicted RBP9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 RFPL4AL1F8VTS6 287 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 F8VVB4 439 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 F8VWA3 439 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 SH2D1BO14796 132 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 TMPRSS2O15393 492 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 HTR3BO95264 441 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 TGFAP01135 160 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 IGKV1D-12P01611 117 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 CHRM2P08172 466 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 PRKACAP17612 351 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 ADRA2CP18825 462 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 GADD45AP24522 165 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 IL2RGP31785 369 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 OR3A4PP47883 348 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 PITPNBP48739 271 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 GNB2P62879 340 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 IL13RA1P78552 427 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 C1orf100Q5SVJ3 147 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 CD276Q5ZPR3 534 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 STUMQ69YW2 141 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 ELP2Q6IA86 826 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 CRIP3Q6Q6R5 217 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 GLIPR1L1Q6UWM5 242 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 ZNF788Q6ZQV5 615 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 C1QL2Q7Z5L3 287 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 TPRA1Q86W33 373 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 BATF2Q8N1L9 274 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 ANGPTL6Q8NI99 470 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 YIPF6Q96EC8 236 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 KCTD7Q96MP8 289 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 HMG20AQ9NP66 347 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 RBFOX1Q9NWB1 397 aaKnown RBP9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 GHRLQ9UBU3 117 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 CLN8Q9UBY8 286 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 OR14J1Q9UGF5 321 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 AK6Q9Y3D8 172 aaKnown RBP9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 V9GY05 133 aa9.94□□□□□ -0.82
SPTLC1-202ENST00000337841 FAM157AC9JC47 383 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 AIREO43918 545 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 CDRT1O95170 752 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 SFTPBP07988 381 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 UBBP0CG47 229 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 IGHV4-31P0DP07 118 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 CD37P11049 281 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 CAPZA1P52907 286 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 C11orf91Q3C1V1 193 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 LRRC10Q5BKY1 277 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 SPIN3Q5JUX0 258 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 AWAT2Q6E213 333 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 OR13F1Q8NGS4 319 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 MSI2Q96DH6 328 aaKnown RBP9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 SDSLQ96GA7 329 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 SSBP3Q9BWW4 388 aaPredicted RBP9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 PLGRKTQ9HBL7 147 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 IL36GQ9NZH8 169 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 SCOCQ9UIL1 159 aa9.93□□□□□ -0.82
SPTLC1-202ENST00000337841 IGKV1D-17A0A075B6S4 117 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 TRAV20A0A0B4J274 112 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 DVL1O14640 695 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 DEGS1O15121 323 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 SIGLEC5O15389 551 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 CD5LO43866 347 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 LY6G6DO95868 133 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 ECDO95905 644 aaPredicted RBP9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 TFAP2AP05549 437 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 MSMBP08118 114 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 CALCBP10092 127 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 GTF2F2P13984 249 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 AMY2BP19961 511 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 RAB3BP20337 219 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 HTR2CP28335 458 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 RPL5P46777 297 aaKnown RBP9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 FGF12P61328 243 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 SCN1BQ07699 218 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 IKZF1Q13422 519 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 ZNF146Q15072 292 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 SLC22A6Q4U2R8 563 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 WDR25Q64LD2 544 aaPredicted RBP9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 CLEC9AQ6UXN8 241 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 ZNF841Q6ZN19 808 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 GPR141Q7Z602 305 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 GLCCI1Q86VQ1 547 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 LYPD6Q86Y78 171 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 OSR2Q8N2R0 312 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 ZNF561Q8N587 486 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 CD177Q8N6Q3 437 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 Q8NFD4 153 aa9.92□□□□□ -0.82
SPTLC1-202ENST00000337841 OR4D6Q8NGJ1 314 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms