RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 LINC01560Q8TB33 94 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 S100PBPQ96BU1 408 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 VRK1Q99986 396 aaPredicted RBP13.77□□□□□ -0.21
PDGFB-201ENST00000331163 IFT22Q9H7X7 185 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 G6PC2Q9NQR9 355 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.21
PDGFB-201ENST00000331163 F5H0A9 414 aaPredicted RBP13.77□□□□□ -0.21
PDGFB-201ENST00000331163 GABARAPH6UMI1 98 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 PRB1P04280 392 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 FGF2P09038 288 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 ACSM1Q08AH1 577 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 KISS1Q15726 138 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 OR2A2Q6IF42 318 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 NANPQ8TBE9 248 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 CASTOR1Q8WTX7 329 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 RND1Q92730 232 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 NPDC1Q9NQX5 325 aaPredicted RBP13.77□□□□□ -0.21
PDGFB-201ENST00000331163 STEAP1Q9UHE8 339 aa13.77□□□□□ -0.21
PDGFB-201ENST00000331163 TRAV39A0A0B4J263 110 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 TRAV20A0A0B4J274 112 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 KANTRA0A1W2PQU2 76 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 ZNF732B4DXR9 585 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 SERPINA5P05154 406 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 KCNJ3P48549 501 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 FAM219AQ8IW50 185 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 OR2AK2Q8NG84 335 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 OR4S1Q8NGB4 309 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 OR4C16Q8NGL9 310 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 IL1F10Q8WWZ1 152 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 DYRK2Q92630 601 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 FAM206AQ9NX38 181 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 NOP16Q9Y3C1 178 aaKnown RBP13.76□□□□□ -0.21
PDGFB-201ENST00000331163 ATP23Q9Y6H3 246 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 F8W036 122 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 ACKR3P25106 362 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 MMP16P51512 607 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 SELENOVP59797 346 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 BLOC1S1P78537 153 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 FLI1Q01543 452 aaPredicted RBP13.76□□□□□ -0.21
PDGFB-201ENST00000331163 FGL1Q08830 312 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 GUCA2BQ16661 112 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 C1orf185Q5T7R7 199 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 SLC25A38Q96DW6 304 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 COMMD9Q9P000 198 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 NKX2-6A6NCS4 301 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 OR2AT4A6NND4 320 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 ERCC1P07992 297 aaPredicted RBP13.76□□□□□ -0.21
PDGFB-201ENST00000331163 ARR3P36575 388 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 KIR2DL2P43627 348 aaPredicted RBP13.76□□□□□ -0.21
PDGFB-201ENST00000331163 TAS2R20P59543 309 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 ZNF626Q68DY1 528 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 ABLIM2Q6H8Q1 611 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 TMEM17Q86X19 198 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 SLAMF9Q96A28 289 aa13.76□□□□□ -0.21
PDGFB-201ENST00000331163 NCKAP5O14513 1909 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 MEGF11A6BM72 1044 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 PRSS3P35030 304 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 GABRA2P47869 451 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 UCNP55089 124 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 BHLHA15Q7RTS1 189 aaPredicted RBP13.75□□□□□ -0.21
PDGFB-201ENST00000331163 SLC16A13Q7RTY0 426 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 NICN1Q9BSH3 213 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 AGPAT2O15120 278 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 DNPH1O43598 174 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 SLC34A2O95436 690 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 IGHMP01871 453 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 VAMP1P23763 118 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 GSK3AP49840 483 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 FXYD4P59646 89 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 HGFACQ04756 655 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 ECH1Q13011 328 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 IKZF1Q13422 519 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 DRAM2Q6UX65 266 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 TMEM104Q8NE00 496 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 THAP6Q8TBB0 222 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 SLC25A40Q8TBP6 338 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 TMEM54Q969K7 222 aa13.75□□□□□ -0.21
PDGFB-201ENST00000331163 CREBBPQ92793 2442 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 AHRRA9YTQ3 701 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 SDCBPO00560 298 aaPredicted RBP13.74□□□□□ -0.21
PDGFB-201ENST00000331163 FAUP35544 74 aaKnown RBP13.74□□□□□ -0.21
PDGFB-201ENST00000331163 B2MP61769 119 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 OR52W1Q6IF63 320 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 KCTD9Q7L273 389 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 OR2Z1Q8NG97 314 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 CCDC107Q8WV48 283 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 SMG1Q96Q15 3661 aaKnown RBP13.74□□□□□ -0.21
PDGFB-201ENST00000331163 SULT1B1O43704 296 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 IL18BPO95998 194 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 CST2P09228 141 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 AKR1C3P42330 323 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 RBP2P50120 134 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 RAG2P55895 527 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 ROM1Q03395 351 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 ADPRHL1Q8NDY3 354 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 DNTTIP1Q9H147 329 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 FOXD3Q9UJU5 478 aaPredicted RBP13.74□□□□□ -0.21
PDGFB-201ENST00000331163 NPTNQ9Y639 398 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 DHRS3O75911 302 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 CD3DP04234 171 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms