RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 SLA2Q9H6Q3 261 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 RNF167Q9H6Y7 350 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 SLC22A13Q9Y226 551 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 RHBDD3Q9Y3P4 386 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 SOX21Q9Y651 276 aaPredicted RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 IGKV1D-43A0A0B4J1Z2 117 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 APOL3O95236 402 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 TGFBR1P36897 503 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 ALDH3B1P43353 468 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 GSK3AP49840 483 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF84P51523 738 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 PCBD1P61457 104 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 TAGLNQ01995 201 aaKnown RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 HNRNPA0Q13151 305 aaKnown RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 MELKQ14680 651 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 SPANXN2Q5MJ10 180 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 RSBN1Q5VWQ0 802 aaPredicted RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 FBXW9Q5XUX1 488 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 FCRLAQ7L513 359 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 CEACAM19Q7Z692 300 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 CCDC36Q8IYA8 594 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 FAM169BQ8N8A8 192 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 GJC3Q8NFK1 279 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 RAB40AQ8WXH6 277 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 TSSK2Q96PF2 358 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 C7orf50Q9BRJ6 194 aaKnown RBP5.48□□□□□ -1.53
CSTF3-201ENST00000323959 TMED9Q9BVK6 235 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 RGCCQ9H4X1 137 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 C12orf4Q9NQ89 552 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 OR5V1Q9UGF6 321 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 FBXL3Q9UKT7 428 aa5.48□□□□□ -1.53
CSTF3-201ENST00000323959 A0A1B0GVY2 172 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 A0A1W2PNR3 127 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 OR6C6A6NF89 314 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 TNFSF11O14788 317 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 IFITM3Q01628 133 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 ASAH1Q13510 395 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 CDK10Q15131 360 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF79Q15937 498 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 MEP1BQ16820 701 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 WDR38Q5JTN6 314 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 UBE2NLQ5JXB2 153 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 ARL9Q6T311 187 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 KLHL24Q6TFL4 600 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 UTS2BQ765I0 119 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 ABHD12BQ7Z5M8 362 aaPredicted RBP5.47□□□□□ -1.53
CSTF3-201ENST00000323959 NR2C2APQ86WQ0 139 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 LYSMD2Q8IV50 215 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 SLAMF6Q96DU3 332 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 GFI1Q99684 422 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 UQCC2Q9BRT2 126 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 HDHD2Q9H0R4 259 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 PPIL3Q9H2H8 161 aaKnown RBP5.47□□□□□ -1.53
CSTF3-201ENST00000323959 ELOVL3Q9HB03 270 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 TMEM38BQ9NVV0 291 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF107Q9UII5 783 aaPredicted RBP5.47□□□□□ -1.53
CSTF3-201ENST00000323959 V9GYS6 101 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 TRAV40A0A0B4J280 105 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 SHISA8B8ZZ34 492 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 SHOXO15266 292 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 CCNKO75909 580 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 SPARCP09486 303 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 RAB6AP20340 208 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 THBS4P35443 961 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 DDOSTP39656 456 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 IER3P46695 156 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 CLDN17P56750 224 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 LSM3P62310 102 aaKnown RBP5.47□□□□□ -1.53
CSTF3-201ENST00000323959 PCGF3Q3KNV8 242 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 OTULINQ96BN8 352 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 TECTBQ96PL2 329 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 AMELYQ99218 206 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 ZNF221Q9UK13 617 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 OR52A1Q9UKL2 312 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 HHLA2Q9UM44 414 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 WIPI2Q9Y4P8 454 aa5.47□□□□□ -1.53
CSTF3-201ENST00000323959 IGHV1-18A0A0C4DH31 117 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 BTBD17A6NE02 478 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 IFITM5A6NNB3 132 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 CENPXA8MT69 81 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 H7C1C5 153 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 LDLRAD4O15165 306 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 SCGNO76038 276 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 OR8G3PP0DMU2 310 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 HSD11B1P28845 292 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 RAD52P43351 418 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 MMP15P51511 669 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 NKX2-5P52952 324 aaPredicted RBP5.46□□□□□ -1.53
CSTF3-201ENST00000323959 LCN6P62502 163 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 MRPS15P82914 257 aaKnown RBP5.46□□□□□ -1.53
CSTF3-201ENST00000323959 PITPNAQ00169 270 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 SLC3A1Q07837 685 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 AVPI1Q5T686 147 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 PYHIN1Q6K0P9 492 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 FAM122CQ6P4D5 195 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 COLCA1Q6ZS62 124 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 PGAP1Q75T13 922 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 DCXRQ7Z4W1 244 aa5.46□□□□□ -1.53
CSTF3-201ENST00000323959 ZCCHC24Q8N2G6 241 aaKnown RBP5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms