RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 SPEM2Q0P670 501 aa12.75□□□□□ -0.37
CLK4-201ENST00000316308 RIPPLY2Q5TAB7 128 aa12.75□□□□□ -0.37
CLK4-201ENST00000316308 HES3Q5TGS1 186 aa12.75□□□□□ -0.37
CLK4-201ENST00000316308 INO80EQ8NBZ0 244 aaPredicted RBP12.75□□□□□ -0.37
CLK4-201ENST00000316308 OR11L1Q8NGX0 322 aa12.75□□□□□ -0.37
CLK4-201ENST00000316308 SPSB1Q96BD6 273 aa12.75□□□□□ -0.37
CLK4-201ENST00000316308 CMSS1Q9BQ75 279 aaKnown RBP12.75□□□□□ -0.37
CLK4-201ENST00000316308 ATMQ13315 3056 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 MAP1BP46821 2468 aaKnown RBP12.74□□□□□ -0.37
CLK4-201ENST00000316308 HSPB6O14558 160 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 ZNF883P0CG24 379 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 ZNF708P17019 499 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 ZP3P21754 424 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 RBMXP38159 391 aaKnown RBP12.74□□□□□ -0.37
CLK4-201ENST00000316308 TAS2R46P59540 309 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 S100A10P60903 97 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 UBA52P62987 128 aaKnown RBP12.74□□□□□ -0.37
CLK4-201ENST00000316308 OR8B8Q15620 311 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 ACTBL2Q562R1 376 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 ZNF611Q8N823 705 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 ASB13Q8WXK3 278 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 NMES1Q9C002 83 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 DEFB127Q9H1M4 99 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 PFDN2Q9UHV9 154 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 PRSS50Q9UI38 385 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 CACNA1GO43497 2377 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 CD79AP11912 226 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 CBX5P45973 191 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
CLK4-201ENST00000316308 OR2A2Q6IF42 318 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 OR1S2Q8NGQ3 325 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 MRPL24Q96A35 216 aaKnown RBP12.74□□□□□ -0.37
CLK4-201ENST00000316308 C10orf35Q96D05 121 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 PIK3IP1Q96FE7 263 aa12.74□□□□□ -0.37
CLK4-201ENST00000316308 AKAP13Q12802 2813 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 PPIAP62937 165 aaKnown RBP12.73□□□□□ -0.37
CLK4-201ENST00000316308 SRSF3P84103 164 aaKnown RBP12.73□□□□□ -0.37
CLK4-201ENST00000316308 PMP22Q01453 160 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 PHLDA2Q53GA4 152 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 SLC22A25Q6T423 547 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 OSR2Q8N2R0 312 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 TMED6Q8WW62 240 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 HPSE2Q8WWQ2 592 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 ZPBPQ9BS86 351 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 PAPOLGQ9BWT3 736 aaKnown RBP12.73□□□□□ -0.37
CLK4-201ENST00000316308 OR2S2Q9NQN1 319 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 SPEF1Q9Y4P9 236 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 RIF1Q5UIP0 2472 aaKnown RBP12.73□□□□□ -0.37
CLK4-201ENST00000316308 KMT2EQ8IZD2 1858 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 GPM6AP51674 278 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 PLGLB1Q02325 96 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 IL15RAQ13261 267 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 SNTB1Q13884 538 aaKnown RBP12.73□□□□□ -0.37
CLK4-201ENST00000316308 CNN3Q15417 329 aaKnown RBP12.73□□□□□ -0.37
CLK4-201ENST00000316308 HIKESHIQ53FT3 197 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.73□□□□□ -0.37
CLK4-201ENST00000316308 POC1AQ8NBT0 407 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 SLAMF9Q96A28 289 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 ZNF488Q96MN9 340 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 ARPC5LQ9BPX5 153 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 C1QTNF5Q9BXJ0 243 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 FAM117AQ9C073 453 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 STARD10Q9Y365 291 aa12.73□□□□□ -0.37
CLK4-201ENST00000316308 GTF3C1Q12789 2109 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 A0A1W2PR80 420 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 OR7C1O76099 320 aaPredicted RBP12.72□□□□□ -0.37
CLK4-201ENST00000316308 RCC1P18754 421 aaPredicted RBP12.72□□□□□ -0.37
CLK4-201ENST00000316308 BCL3P20749 454 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 MEOX1P50221 254 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 IGSF11Q5DX21 431 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 ASCL4Q6XD76 172 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 ZNF552Q9H707 407 aaPredicted RBP12.72□□□□□ -0.37
CLK4-201ENST00000316308 RAB18Q9NP72 206 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 MED9Q9NWA0 146 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 NUP50Q9UKX7 468 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 MRPS18CQ9Y3D5 142 aaKnown RBP12.72□□□□□ -0.37
CLK4-201ENST00000316308 SPTBN2O15020 2390 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 IGKV3D-15A0A087WSY6 115 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 TRBV6-7A0A0A0MS04 114 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 IGHV3-64DA0A0J9YX35 117 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 PIGPP57054 158 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 LHFPL2Q6ZUX7 228 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 MYPOPQ86VE0 399 aaPredicted RBP12.72□□□□□ -0.37
CLK4-201ENST00000316308 SHARPINQ9H0F6 387 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 PCDHB10Q9UN67 800 aa12.72□□□□□ -0.37
CLK4-201ENST00000316308 ZNF816-ZNF321PA0A0X1KG74 233 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 LOC105371267A0A1B0GV96 52 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 FARS2O95363 451 aaKnown RBP12.71□□□□□ -0.37
CLK4-201ENST00000316308 APOC3P02656 99 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 PRKACBP22694 351 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 FCGR2CP31995 323 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 HAAOP46952 286 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 PAN3Q58A45 887 aaKnown RBP12.71□□□□□ -0.37
CLK4-201ENST00000316308 C17orf50Q8WW18 174 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 TMEM45BQ96B21 275 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 BSCL2Q96G97 398 aaPredicted RBP12.71□□□□□ -0.37
CLK4-201ENST00000316308 SLC25A32Q9H2D1 315 aa12.71□□□□□ -0.37
CLK4-201ENST00000316308 TNRC6AQ8NDV7 1962 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms