RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TNFRSF13BO14836 293 aaPredicted RBP20.43■□□□□ 0.86
HOXC9-201ENST00000303450 TMPRSS2O15393 492 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 CALCBP10092 127 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 PRKACAP17612 351 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 GABRA2P47869 451 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 PSMD7P51665 324 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 AWAT2Q6E213 333 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 ASCL4Q6XD76 172 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 GPR141Q7Z602 305 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 OR8B3Q8NGG8 313 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 ANGPTL6Q8NI99 470 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 NEIL1Q96FI4 390 aaPredicted RBP20.43■□□□□ 0.86
HOXC9-201ENST00000303450 OR8B2Q96RD0 313 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 CCL13Q99616 98 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 CENPOQ9BU64 300 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 FUNDC2Q9BWH2 189 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 OR14J1Q9UGF5 321 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 SHISA3A0PJX4 238 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 NKX6-3A6NJ46 265 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 RFPL4AA6NLU0 287 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 RFPL4AL1F8VTS6 287 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 KNG1P01042 644 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 INHBBP09529 407 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 WNT2P09544 360 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 CPT2P23786 658 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 ATPAF1Q5TC12 328 aaPredicted RBP20.43■□□□□ 0.86
HOXC9-201ENST00000303450 GLIPR1L1Q6UWM5 242 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 SLC36A1Q7Z2H8 476 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 OR4D6Q8NGJ1 314 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 DNTTIP1Q9H147 329 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 PLGRKTQ9HBL7 147 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 HMG20AQ9NP66 347 aa20.43■□□□□ 0.86
HOXC9-201ENST00000303450 IGKV1D-17A0A075B6S4 117 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 F5H0A9 414 aaPredicted RBP20.42■□□□□ 0.86
HOXC9-201ENST00000303450 CSTBP04080 98 aaKnown RBP20.42■□□□□ 0.86
HOXC9-201ENST00000303450 MTNR1BP49286 362 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 BMXP51813 675 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 C1orf100Q5SVJ3 147 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 OR10K1Q8NGX5 313 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 GFI1Q99684 422 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 RNF167Q9H6Y7 350 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 PCDHB16Q9NRJ7 776 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 IL36GQ9NZH8 169 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 KAAG1Q9UBP8 84 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 V9GY05 133 aa20.42■□□□□ 0.86
HOXC9-201ENST00000303450 ZNF780AO75290 641 aaPredicted RBP20.41■□□□□ 0.86
HOXC9-201ENST00000303450 HTR3BO95264 441 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 TFF1P04155 84 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 FOSL1P15407 271 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 RAB3BP20337 219 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 HTR2CP28335 458 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 PRDX2P32119 198 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 RPL5P46777 297 aaKnown RBP20.41■□□□□ 0.86
HOXC9-201ENST00000303450 SNU13P55769 128 aaKnown RBP20.41■□□□□ 0.86
HOXC9-201ENST00000303450 SLC22A6Q4U2R8 563 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 ESCO2Q56NI9 601 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 ELP2Q6IA86 826 aa20.41■□□□□ 0.86
HOXC9-201ENST00000303450 HIVEP1P15822 2718 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 DOCK11Q5JSL3 2073 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 FAM157AC9JC47 383 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 CD37P11049 281 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 AMY2BP19961 511 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 SERPINA2P20848 420 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 PITPNBP48739 271 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 GZMKP49863 264 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 LSM3P62310 102 aaKnown RBP20.4■□□□□ 0.86
HOXC9-201ENST00000303450 GPR176Q14439 515 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 SPIN3Q5JUX0 258 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 ZNF788Q6ZQV5 615 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 TPRA1Q86W33 373 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 OR6M1Q8NGM8 313 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 TBC1D15Q8TC07 691 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 MED30Q96HR3 178 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 IL36RNQ9UBH0 155 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 CTSZQ9UBR2 303 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 GLS2Q9UI32 602 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 ZNF222Q9UK12 451 aa20.4■□□□□ 0.86
HOXC9-201ENST00000303450 ABCA1O95477 2261 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 IGHV4-31P0DP07 118 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 CEBPDP49716 269 aaPredicted RBP20.39■□□□□ 0.85
HOXC9-201ENST00000303450 OR10A3P58181 314 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 FGF12P61328 243 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 SEC61A1P61619 476 aaKnown RBP20.39■□□□□ 0.85
HOXC9-201ENST00000303450 IL13RA1P78552 427 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 CD177Q8N6Q3 437 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 FAM216BQ8N7L0 139 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 GAFA1Q96PS6 74 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 GHRLQ9UBU3 117 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 CLN8Q9UBY8 286 aa20.39■□□□□ 0.85
HOXC9-201ENST00000303450 B4DSR2 109 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 SLC17A2O00624 439 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 SLC22A1O15245 554 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 DUSP1P28562 367 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 SDC2P34741 201 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 GNB2P62879 340 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 IKZF1Q13422 519 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 ZNF146Q15072 292 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 DGUOKQ16854 277 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 CYB5R2Q6BCY4 276 aa20.38■□□□□ 0.85
HOXC9-201ENST00000303450 LINC01356Q8N9X3 169 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms