RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ank3G5E8K5 1961 aa8.71□□□□□ -1.01
Hmgb1-201ENSMUST00000085546 Obsl1D3YYU8 1804 aaKnown RBP8.71□□□□□ -1.01
Hmgb1-201ENSMUST00000085546 Gm13276A0A087WR18 182 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Aadacl3A2A7Z8 408 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Pramef6A2A8M8 474 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Zfp937A2ANU7 503 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Gm6880A3KG45 208 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Vmn1r68E9Q0V3 319 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Gm17669F6QL70 154 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 P01675 107 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 P01676 107 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 P01677 107 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 P01678 107 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Ca6P18761 317 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rpl12P35979 165 aaKnown RBP8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Hist1h1aP43275 213 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rpl29P47915 160 aaKnown RBP8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Dok1P97465 482 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Perm1Q149B8 807 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Lrrc30Q3UV48 300 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 A3galt2Q3V1N9 370 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Klhl13Q80TF4 654 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Reps2Q80XA6 521 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Arl15Q8BGR6 204 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Prss27Q8BJR6 328 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Zfp57Q8C6P8 421 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Vmn1r17Q8R2D8 303 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Olfr382Q8VF79 312 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Olfr916Q8VG53 310 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rnf126Q91YL2 313 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Tceal8Q9CZY2 117 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Agpat5Q9D1E8 365 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 HaghlQ9DB32 283 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Baz2aQ91YE5 1889 aaKnown RBP8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Cela3aA2A9U8 283 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Kcnk15B2RVL1 343 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Psg20E9Q9B4 475 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Prps1l3G3UXL2 318 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Gm21834J3QN05 151 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Tmem178bM0QWJ9 172 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Socs1O35716 212 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 TxnP10639 105 aaKnown RBP8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Mmp3P28862 477 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 CpoxP36552 443 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Ppp1ccP63087 323 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Csf2raQ00941 388 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rnf166Q3U9F6 237 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Trp53i11Q4QQM4 189 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Lasp1Q61792 263 aaKnown RBP8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Olfr16Q62007 309 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Zfp180Q6NZI9 655 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Slc22a27Q76M72 551 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Znf32Q80V23 272 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Prickle3Q80VL3 624 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 CslQ80X68 466 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Mfsd11Q8BJ51 449 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 PstkQ8BP74 359 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Cphx2Q8BX39 182 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Mchr1Q8JZL2 353 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Tmem144Q8VEH0 348 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Q9CQT9 129 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Cnih4Q9CX13 139 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Shisal2bQ9D1Y9 158 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rnf128Q9D304 428 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Prps1Q9D7G0 318 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Olfr933Q9EQA0 308 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Elovl4Q9EQC4 312 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rcl1Q9JJT0 373 aaKnown RBP8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Dctn6Q9WUB4 190 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Vmn1r49Q9WUF1 310 aa8.71□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Olfr623E9Q382 317 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Apoa2P09813 102 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Cyr61P18406 379 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 NfkbidQ2TB02 327 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Isg20l2Q3U1G5 368 aaKnown RBP8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Tmem171Q4KL18 322 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Taar8bQ5QD06 344 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Vmn1r196Q5SVD5 301 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Q8BHG2 160 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Immp2lQ8BPT6 175 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Lyrm2Q8R033 88 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Angptl8Q8R1L8 198 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Alg12Q8VDB2 486 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Olfr165Q8VFA2 313 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Olfr136Q8VG72 312 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Alkbh4Q9D8F1 300 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Reg4Q9D8G5 157 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Scp2d1Q9DAH1 156 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Clcf1Q9QZM3 225 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Igkv12-46A0A140T8P6 115 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rhox1B1APN4 224 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Zfp764E9QAP1 431 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Gm4141K9J7H2 306 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Bak1O08734 209 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Klk1b26P36369 261 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Bcl6P41183 707 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rab11bP46638 218 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Srp9P49962 86 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Slc7a10P63115 530 aa8.7□□□□□ -1.02
Hmgb1-201ENSMUST00000085546 Rpl19P84099 196 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms