RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Sdk2Q6V4S5 2176 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 KantrA0A1W2P7I0 76 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Slc18b1D3Z5L6 459 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 H2-T10F6T1I5 379 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Gm5458L7N219 204 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Tcstv3O70518 169 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Sh2d7Q8BI17 458 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Rdh16f2Q8K3M1 318 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Snapc5Q8R2K7 98 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Rcc1Q8VE37 421 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Slc22a26Q91WJ2 552 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Mob1aQ921Y0 216 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Rpl14Q9CR57 217 aaKnown RBP16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Vmn1r172Q9EPS4 313 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 GltpQ9JL62 209 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Cxcl15Q9WVL7 167 aa16.59■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Trav12n-2A0A075B626 113 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Slc18a3O35304 530 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Hyal2O35632 473 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Stc2O88452 296 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 S1pr2P52592 352 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Prss43Q76HL1 382 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Tmprss7Q8BIK6 829 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 4930451G09RikQ8C5G4 195 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Vmn1r19Q8R2C7 308 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Rnf113a1Q8R3P8 341 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Crtac1Q8R555 646 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Swsap1Q8VCI7 278 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Steap4Q923B6 470 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Mtfp1Q9CRB8 166 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Gm26992S4R1A3 76 aa16.58■□□□□ 0.25
Shkbp1-201ENSMUST00000003857 Trav10nA0A075B622 114 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Trav10A0A075B642 114 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Esp16A8R0U9 85 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr623E9Q382 317 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Camk2bP28652 542 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 StarP51557 284 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Mrgprb2Q3KNA1 338 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Bahd1Q497V6 772 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Dact2Q7TN08 757 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 St8sia6Q8K4T1 398 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Znf319Q9ERR8 581 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tmprss2Q9JIQ8 490 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Sec61a2Q9JLR1 476 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Cln8Q9QUK3 288 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 FaimQ9WUD8 179 aa16.58■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Mtg2A2AFK4 405 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Amy2P00688 508 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Zfp2P08043 459 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Ccl5P30882 91 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Upk2P38575 184 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr145Q60882 310 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Map3k3Q61084 626 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Zfp955aQ80XR7 545 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 GldnQ8BMF8 549 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Q8BR90 294 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vash1Q8C1W1 375 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Fam120cQ8C3F2 1091 aaKnown RBP16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr812Q8VG64 310 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr992Q8VGC6 309 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Arrdc1Q99KN1 434 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Eef1akmt1Q9CY45 214 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gfod2Q9CYH5 385 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Dmrtc1c1Q9D410 238 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Ndufa9Q9DC69 377 aaKnown RBP16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr1289A0A288CFY5 326 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm6890A2BG94 208 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm42957D6RFQ2 366 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr424E9Q0Q2 315 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm20403G3UYB0 123 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tcn2O88968 430 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Igh-VJ558P01758 117 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Il6P08505 211 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Mmp9P41245 730 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Galr1P56479 348 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 CycsP62897 105 aaKnown RBP16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr3Q60879 313 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Thap4Q6P3Z3 569 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tmem230Q8CIB6 120 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Fn3krpQ8K274 309 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Tmem234Q8R1E7 140 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr777Q8VFH3 311 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr350Q8VFP8 312 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr488Q8VG02 314 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vmn1r43Q8VIC9 329 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Dcp1aQ91YD3 602 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Atp23Q9CWQ3 201 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Pga5Q9D106 387 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Asf1bQ9DAP7 202 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Spry4Q9WTP2 300 aa16.57■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Gm14444A2ARW3 426 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Znf551B2RUI1 696 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Olfr225E9PWF9 419 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 1700017D01RikG5E851 209 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Trav13d-3J3QMG8 112 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vmn2r32K7N686 852 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 S1pr1O08530 382 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Vmn2r42O35192 852 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 P01634 136 aa16.56■□□□□ 0.24
Shkbp1-201ENSMUST00000003857 Irf1P15314 329 aa16.56■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms