RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 GSTZ1O43708 216 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 CA3P07451 260 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 SLC48A1Q6P1K1 146 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 HTR3DQ70Z44 454 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 SPICQ8N5J4 248 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 OR5M11Q96RB7 305 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 HSD17B10Q99714 261 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 OR2D2Q9H210 308 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 C11orf94C9JXX5 98 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 ZCCHC14Q8WYQ9 949 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 RPEQ96AT9 228 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 C1RLQ9NZP8 487 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 BOLA1Q9Y3E2 137 aa17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 RBFOX2O43251 390 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNA1A-257ENST00000638009 FAHD2AQ96GK7 314 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 TWIST1Q15672 202 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 RGS7BPQ6MZT1 257 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 GLDNQ6ZMI3 551 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 SDCBPO00560 298 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 TMPRSS11DO60235 418 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 ZNF273Q14593 569 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 ZNF788Q6ZQV5 615 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 HIST1H4GQ99525 98 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 NIPSNAP1Q9BPW8 284 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 MAGT1Q9H0U3 335 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 PRO1933Q9H354 126 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 TYMSP04818 313 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 SNRPNP63162 240 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 FNDC7Q5VTL7 733 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 PWWP2BQ6NUJ5 590 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 ELOVL1Q9BW60 279 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 RNASE1P07998 156 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 FUT3P21217 361 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 ERVFRD-1P60508 538 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 AESQ08117 197 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 OR2W3Q7Z3T1 314 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 TCEAL8Q8IYN2 117 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 PRSS37A4D1T9 235 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 NDUFB3O43676 98 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 SRP14P37108 136 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 NKAIN1Q4KMZ8 207 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 VWA2Q5GFL6 755 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 ACSM5Q6NUN0 579 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 CLEC2DQ9UHP7 191 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 TCF21O43680 179 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 IGHA1P01876 353 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 IGHA2P01877 340 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 HTR6P50406 440 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 DUSP8Q13202 625 aa17.43■□□□□ 0.38
CACNA1A-257ENST00000638009 MRC1P22897 1456 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 GZMKP49863 264 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 OR4S2Q8NH73 311 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 NUDCD2Q8WVJ2 157 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 ZNF324O75467 553 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 CXorf1O96002 111 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 HTRA3P83110 453 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 ZNF511Q8NB15 262 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 RDH5Q92781 318 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 DERL3Q96Q80 235 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 OR6C3Q9NZP0 311 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 LIPAP38571 399 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 NMUP48645 174 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 FOXO1Q12778 655 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 RRN3P1Q2M238 152 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 HFEQ30201 348 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 FAHD2BQ6P2I3 314 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 PFN4Q8NHR9 129 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 MRGPRX4Q96LA9 322 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 OR5B21A6NL26 309 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 ORM2P19652 201 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 PRDM7Q9NQW5 492 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 CST7O76096 145 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 UBE2L3P68036 154 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 DGCR2P98153 550 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 FAM53CQ9NYF3 392 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 ARAP2Q8WZ64 1704 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 GNG3P63215 75 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 CALHM1Q8IU99 346 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 H0YIG0 161 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 IQCF3P0C7M6 154 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 DOT1LQ8TEK3 1739 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 PIK3IP1Q96FE7 263 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 ATOH8Q96SQ7 321 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 MS4A8Q9BY19 250 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 AKIRIN1Q9H9L7 192 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 SLC52A3Q9NQ40 469 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 UQCR10Q9UDW1 63 aa17.42■□□□□ 0.38
CACNA1A-257ENST00000638009 WNT3P56703 355 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 SPNS3Q6ZMD2 512 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 C1QTNF6Q9BXI9 259 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 OR2W1Q9Y3N9 320 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 DIRC3C9JPN6 131 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 NAT2P11245 290 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 THBS4P35443 961 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 FAM78BQ5VT40 261 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 OR51E1Q8TCB6 317 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 SPPL3Q8TCT6 385 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 IGKV6D-41A0A0C4DH26 115 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 KISS1RQ969F8 398 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms