RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 CCDC58Q4VC31 144 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 DUX4L9Q6RFH8 374 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-217ENST00000624009 CALHM1Q8IU99 346 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 BCL6BQ8N143 479 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-217ENST00000624009 APH1BQ8WW43 257 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 GCDHQ92947 438 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-217ENST00000624009 BORCS8Q96FH0 119 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 C4orf36Q96KX1 117 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 METTL8Q9H825 291 aaKnown RBP10.25□□□□□ -0.77
LINC00963-217ENST00000624009 NEK6Q9HC98 313 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 FGF20Q9NP95 211 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-217ENST00000624009 SNTG1Q9NSN8 517 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 ERVK13-1Q9NX77 482 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 DUX4Q9UBX2 424 aa10.25□□□□□ -0.77
LINC00963-217ENST00000624009 A0A1W2PPH5 198 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 RFPL4AA6NLU0 287 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 RFPL4AL1F8VTS6 287 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 CASQ2O14958 399 aaPredicted RBP10.24□□□□□ -0.77
LINC00963-217ENST00000624009 SYNGR1O43759 233 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 WBP4O75554 376 aaKnown RBP10.24□□□□□ -0.77
LINC00963-217ENST00000624009 SFTPBP07988 381 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 HKR1P10072 659 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 PRDX2P32119 198 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 RBP2P50120 134 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 ATP1B3P54709 279 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 FOXL1Q12952 345 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 BLMHQ13867 455 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 SLC9A3R2Q15599 337 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 ODF4Q2M2E3 257 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 ZNF691Q5VV52 312 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 NCR3LG1Q68D85 454 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 Q6YL49 198 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 LHFPL2Q6ZUX7 228 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 MKXQ8IYA7 352 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 OR5D13Q8NGL4 314 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 CEP19Q96LK0 163 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 C1orf147Q96MC9 270 aaPredicted RBP10.24□□□□□ -0.77
LINC00963-217ENST00000624009 MYRFQ9Y2G1 1151 aa10.24□□□□□ -0.77
LINC00963-217ENST00000624009 CAB39Q9Y376 341 aaPredicted RBP10.24□□□□□ -0.77
LINC00963-217ENST00000624009 IGKV1-27A0A075B6S5 117 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 H0YAE9 185 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 J3QLW9 94 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 RGS9O75916 674 aaPredicted RBP10.23□□□□□ -0.77
LINC00963-217ENST00000624009 SELLP14151 372 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 ZNF19P17023 458 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 ZNF20P17024 532 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 NDUFB7P17568 137 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 GABRA2P47869 451 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 GBX2P52951 348 aaPredicted RBP10.23□□□□□ -0.77
LINC00963-217ENST00000624009 GMFBP60983 142 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 ELF3P78545 371 aaPredicted RBP10.23□□□□□ -0.77
LINC00963-217ENST00000624009 DMRTC1Q5HYR2 192 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 C12orf54Q6X4T0 127 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 BRD3OSQ6XYD6 125 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 VMO1Q7Z5L0 202 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 LHFPL3Q86UP9 236 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 LDLRAD3Q86YD5 345 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 RDH10Q8IZV5 341 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 PARP16Q8N5Y8 322 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 CD177Q8N6Q3 437 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 ZNRF1Q8ND25 227 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 OR52I1Q8NGK6 324 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 SSMEM1Q8WWF3 244 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 TNFRSF14Q92956 283 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 ADAT3Q96EY9 351 aaPredicted RBP10.23□□□□□ -0.77
LINC00963-217ENST00000624009 COMMD4Q9H0A8 199 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 MTCH1Q9NZJ7 389 aa10.23□□□□□ -0.77
LINC00963-217ENST00000624009 IGKV1-9A0A0C4DH69 117 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 TRBV2A0A0J9YWF9 115 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 hCG_1809904A0A1W2PP81 198 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 A0A1W2PPE2 198 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 FAM230AA0A1W2PPH8 454 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 A0A1W2PR64 198 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 A0A1W2PRV1 198 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 A6NIN4 97 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 K7N7A8 449 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 ZFPL1O95159 310 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 CYB5AP00167 134 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 RBP4P02753 201 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 CHRM2P08172 466 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 LIMS3P0CW19 117 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 LIMS4P0CW20 117 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 ATF1P18846 271 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 EEF1B2P24534 225 aaKnown RBP10.22□□□□□ -0.77
LINC00963-217ENST00000624009 AZGP1P25311 298 aaKnown RBP10.22□□□□□ -0.77
LINC00963-217ENST00000624009 UBE2E1P51965 193 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 ADARB1P78563 741 aaKnown RBP10.22□□□□□ -0.77
LINC00963-217ENST00000624009 ACSM1Q08AH1 577 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 MED21Q13503 144 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 ZNF146Q15072 292 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 RCN1Q15293 331 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 DEFB112Q30KQ8 113 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 SPIN3Q5JUX0 258 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 OGFRL1Q5TC84 451 aaPredicted RBP10.22□□□□□ -0.77
LINC00963-217ENST00000624009 C16orf87Q6PH81 154 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 FIP1L1Q6UN15 594 aaKnown RBP10.22□□□□□ -0.77
LINC00963-217ENST00000624009 TMPRSS11AQ6ZMR5 421 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 ANGPTL5Q86XS5 388 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 SAXO1Q8IYX7 474 aa10.22□□□□□ -0.77
LINC00963-217ENST00000624009 FGFRL1Q8N441 504 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms