RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RRP15Q9Y3B9 282 aaKnown RBP7.25□□□□□ -1.25
SSBP4-208ENST00000600628 SIRT4Q9Y6E7 314 aaPredicted RBP7.25□□□□□ -1.25
SSBP4-208ENST00000600628 FBN3Q75N90 2809 aa7.25□□□□□ -1.25
SSBP4-208ENST00000600628 ZNF737O75373 536 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 RGS9O75916 674 aaPredicted RBP7.24□□□□□ -1.25
SSBP4-208ENST00000600628 HTR1AP08908 422 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 GLRA1P23415 457 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 RBP2P50120 134 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 RPS11P62280 158 aaKnown RBP eCLIP7.24□□□□□ -1.25
SSBP4-208ENST00000600628 IL13RA1P78552 427 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 CDK5R1Q15078 307 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 ODF4Q2M2E3 257 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 DMKNQ6E0U4 476 aaPredicted RBP7.24□□□□□ -1.25
SSBP4-208ENST00000600628 RNF144BQ7Z419 303 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 COMMD2Q86X83 199 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 ANGPTL5Q86XS5 388 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 BPIFB2Q8N4F0 458 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 CD177Q8N6Q3 437 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 KIR3DL3Q8N743 410 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 Q8N7P7 452 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 PNLDC1Q8NA58 520 aaKnown RBP7.24□□□□□ -1.25
SSBP4-208ENST00000600628 Q8NFD4 153 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 TNFRSF14Q92956 283 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 SPSB1Q96BD6 273 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 FGGYQ96C11 551 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 MRPL48Q96GC5 212 aaKnown RBP7.24□□□□□ -1.25
SSBP4-208ENST00000600628 MED30Q96HR3 178 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 JMJD8Q96S16 334 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 SLC6A7Q99884 636 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 PDCD1LG2Q9BQ51 273 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 SUCNR1Q9BXA5 334 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 CLEC2DQ9UHP7 191 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 GTF2A1LQ9UNN4 478 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 KPTNQ9Y664 436 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 VWFP04275 2813 aa7.24□□□□□ -1.25
SSBP4-208ENST00000600628 IGKV1-12A0A0C4DH73 117 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 CENPVL3A0A0U1RRI6 287 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 IRGMA1A4Y4 181 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 CLDN34H7C241 214 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 GPX5O75715 221 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 GATBO75879 557 aaKnown RBP7.23□□□□□ -1.25
SSBP4-208ENST00000600628 IGKV1D-12P01611 117 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 TFF1P04155 84 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 CD1AP06126 327 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 SFTPBP07988 381 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 CCDC159P0C7I6 412 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 ATF1P18846 271 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 GTF2A1P52655 376 aaPredicted RBP7.23□□□□□ -1.25
SSBP4-208ENST00000600628 ZP1P60852 638 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 FGF12P61328 243 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 ST3GAL4Q11206 333 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 RIPK1Q13546 671 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 ZNF146Q15072 292 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 SMIM21Q3B7S5 101 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 ARMCX4Q5H9R4 360 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 OR2G6Q5TZ20 316 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 RPL22L1Q6P5R6 122 aaKnown RBP7.23□□□□□ -1.25
SSBP4-208ENST00000600628 KCTD8Q6ZWB6 473 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 C8orf59Q8N0T1 100 aaPredicted RBP7.23□□□□□ -1.25
SSBP4-208ENST00000600628 BCL6BQ8N143 479 aaPredicted RBP7.23□□□□□ -1.25
SSBP4-208ENST00000600628 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.23□□□□□ -1.25
SSBP4-208ENST00000600628 ZNRF1Q8ND25 227 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 OR5T2Q8NGG2 359 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 C22orf15Q8WYQ4 148 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 TMIGD2Q96BF3 282 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 PGLYRP3Q96LB9 341 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 ZNF488Q96MN9 340 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 WDFY2Q96P53 400 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 CNTD2Q9H8S5 307 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 SNTG1Q9NSN8 517 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 BABAM2Q9NXR7 383 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 POLDIP2Q9Y2S7 368 aa7.23□□□□□ -1.25
SSBP4-208ENST00000600628 EXOSC1Q9Y3B2 195 aaKnown RBP7.23□□□□□ -1.25
SSBP4-208ENST00000600628 KIAA2026Q5HYC2 2103 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 TRBV23-1A0A0A0MS06 115 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 TRBV2A0A0J9YWF9 115 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 TRBV5-5A0A0J9YX44 114 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 EFCAB10A6NFE3 127 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 RFPL4AA6NLU0 287 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 RFPL4AL1F8VTS6 287 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 TRIM77I1YAP6 450 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 K7N7A8 449 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 M0R1W7 72 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 XPNPEP2O43895 674 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 SERPINA3P01011 423 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 KNG1P01042 644 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 MYF6P23409 242 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 AZGP1P25311 298 aaKnown RBP7.22□□□□□ -1.25
SSBP4-208ENST00000600628 LMO1P25800 156 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 C21orf33P30042 268 aaPredicted RBP7.22□□□□□ -1.25
SSBP4-208ENST00000600628 PRDX2P32119 198 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 COMPP49747 757 aaPredicted RBP7.22□□□□□ -1.25
SSBP4-208ENST00000600628 AQP4P55087 323 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 DLX6P56179 175 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 SLC35A2P78381 396 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 ACSM1Q08AH1 577 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 PDZK1IP1Q13113 114 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 IRF3Q14653 427 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 LRRC10Q5BKY1 277 aa7.22□□□□□ -1.25
SSBP4-208ENST00000600628 HCP5Q6MZN7 132 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms