RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 SPSB1Q96BD6 273 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 C10orf35Q96D05 121 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 C1orf147Q96MC9 270 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 HIST1H2AAQ96QV6 131 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 BPESC1Q9GZL8 116 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 TLNRD1Q9H1K6 362 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 NARFLQ9H6Q4 476 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 CNTD2Q9H8S5 307 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 NEK6Q9HC98 313 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 TCF7L1Q9HCS4 588 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 MYOZ1Q9NP98 299 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 YAE1D1Q9NRH1 226 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 SNTG1Q9NSN8 517 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 DECR2Q9NUI1 292 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 RBFOX1Q9NWB1 397 aaKnown RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 MTCH1Q9NZJ7 389 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 CKLFQ9UBR5 152 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 ZDHHC8Q9ULC8 765 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 FOXJ3Q9UPW0 622 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 SLC7A11Q9UPY5 501 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 SONP18583 2426 aaKnown RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 IGHV1-69-2A0A0G2JMI3 117 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 VWC2LB2RUY7 222 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 J3QT63 122 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 ARL6IP5O75915 188 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 SFTPBP07988 381 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 SELLP14151 372 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 PRKACBP22694 351 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 MYL9P24844 172 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 ZNF93P35789 620 aaPredicted RBP8.09□□□□□ -1.11
DDX39A-220ENST00000593008 RPS19P39019 145 aaKnown RBP8.09□□□□□ -1.11
DDX39A-220ENST00000593008 SRP9P49458 86 aaKnown RBP8.09□□□□□ -1.11
DDX39A-220ENST00000593008 RBP2P50120 134 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 LOXL1Q08397 574 aaPredicted RBP8.09□□□□□ -1.11
DDX39A-220ENST00000593008 PCGF3Q3KNV8 242 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 SFRP4Q6FHJ7 346 aaPredicted RBP8.09□□□□□ -1.11
DDX39A-220ENST00000593008 LHFPL2Q6ZUX7 228 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 FGFRL1Q8N441 504 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 SPERTQ8NA61 448 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 DEFB108BQ8NET1 73 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 PHYHIPQ92561 330 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 SLC25A28Q96A46 364 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 C12orf43Q96C57 262 aaKnown RBP8.09□□□□□ -1.11
DDX39A-220ENST00000593008 KCTD7Q96MP8 289 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 GPER1Q99527 375 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 GAL3ST1Q99999 423 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 BARHL1Q9BZE3 327 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 EGLN1Q9GZT9 426 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 ABCB9Q9NP78 766 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 TMEM138Q9NPI0 162 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 TMEM106BQ9NUM4 274 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 NKIRAS2Q9NYR9 191 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 IL19Q9UHD0 177 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 METRNQ9UJH8 293 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 PPP1R3CQ9UQK1 317 aa8.09□□□□□ -1.11
DDX39A-220ENST00000593008 DYSFO75923 2080 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 TRAV1-2A0A0B4J238 106 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 TMEM210A6NLX4 147 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 IFNL4K9M1U5 179 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 NDUFS8O00217 210 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 CD5LO43866 347 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 IGHV4-31P0DP07 118 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 TMEM225BP0DP42 221 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
DDX39A-220ENST00000593008 ZNF16P17020 682 aaPredicted RBP8.08□□□□□ -1.12
DDX39A-220ENST00000593008 RAB3BP20337 219 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 GALP22466 123 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 MPZP25189 248 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 DUSP1P28562 367 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 RANBP1P43487 201 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 GATA4P43694 442 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 MTNR1BP49286 362 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 EFNB2P52799 333 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 ATP1B3P54709 279 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 PDZK1IP1Q13113 114 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 PDCD1Q15116 288 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 ZMYND11Q15326 602 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 FAM76BQ5HYJ3 339 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 FAM166AQ6J272 317 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 GLIPR1L1Q6UWM5 242 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 TMEM104Q8NE00 496 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 OR5T2Q8NGG2 359 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 FAM46BQ96A09 425 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 NRIP2Q9BQI9 281 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 DCSTAMPQ9H295 470 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 FN3KRPQ9HA64 309 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 C14orf119Q9NWQ9 140 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 MRPS28Q9Y2Q9 187 aaKnown RBP8.08□□□□□ -1.12
DDX39A-220ENST00000593008 JMJD1CQ15652 2540 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 CR1P17927 2039 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 ABCA1O95477 2261 aa8.08□□□□□ -1.12
DDX39A-220ENST00000593008 SVEP1Q4LDE5 3571 aa8.07□□□□□ -1.12
DDX39A-220ENST00000593008 ABCA2Q9BZC7 2435 aa8.07□□□□□ -1.12
DDX39A-220ENST00000593008 TMEM178BH3BS89 294 aa8.07□□□□□ -1.12
DDX39A-220ENST00000593008 FCN3O75636 299 aa8.07□□□□□ -1.12
DDX39A-220ENST00000593008 ALX3O95076 343 aa8.07□□□□□ -1.12
DDX39A-220ENST00000593008 PAHP00439 452 aa8.07□□□□□ -1.12
DDX39A-220ENST00000593008 ALDOBP05062 364 aa8.07□□□□□ -1.12
DDX39A-220ENST00000593008 PGA5P0DJD9 388 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms