RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 IGKV1D-17A0A075B6S4 117 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 TMEM210A6NLX4 147 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 OR2AT4A6NND4 320 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 ARPC2O15144 300 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 CCDC22O60826 627 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 RHBDL1O75783 438 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 SOX14O95416 240 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 ACAA1P09110 424 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 CD28P10747 220 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 H2AFXP16104 143 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 GLRA1P23415 457 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 CFL1P23528 166 aaKnown RBP6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 MSX2P35548 267 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 ARL3P36405 182 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 BMXP51813 675 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 SLC25A1P53007 311 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 CAV3P56539 151 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 LOXL3P58215 753 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 PPP1R8Q12972 351 aaKnown RBP6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 PLA1AQ53H76 456 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 LINC01590Q5TEZ4 76 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 CD300LDQ6UXZ3 194 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 RASSF6Q6ZTQ3 369 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 ERI1Q8IV48 349 aaKnown RBP6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 MKXQ8IYA7 352 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 LINC00471Q8N535 108 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 OR52H1Q8NGJ2 320 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 RNF133Q8WVZ7 376 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 OR5P3Q8WZ94 311 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 PIGCQ92535 297 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 SGCDQ92629 289 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 PHF21AQ96BD5 680 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 MED30Q96HR3 178 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 PGAM5Q96HS1 289 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 RNF170Q96K19 258 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 LYZL4Q96KX0 146 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 NSMCE2Q96MF7 247 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 INTS14Q96SY0 518 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 ABHD6Q9BV23 337 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 TSSK6Q9BXA6 273 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 TINAGL1Q9GZM7 467 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 NPFFR1Q9GZQ6 430 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 FAM234AQ9H0X4 552 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 MEGF9Q9H1U4 602 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 OR10A2Q9H208 303 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 SP140LQ9H930 580 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 MED20Q9H944 212 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 ZNF702PQ9H963 129 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 RAB18Q9NP72 206 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 ARMC1Q9NVT9 282 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 NECAP2Q9NVZ3 263 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 IL20Q9NYY1 176 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 ZNF222Q9UK12 451 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 MPC1Q9Y5U8 109 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 LYVE1Q9Y5Y7 322 aa6.31□□□□□ -1.4
SMCHD1-210ENST00000583800 SAC3D1A6NKF1 404 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 FAM183AA6NL82 134 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 ZNF785A8K8V0 405 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 TNFRSF11BO00300 401 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 XPNPEP2O43895 674 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 CST4P01036 141 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 APOC1P02654 83 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 H2BFMP0C1H6 154 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 PSG2P11465 335 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 COX7A1P24310 79 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 DCTDP32321 178 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 OPRL1P41146 370 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 GPM6AP51674 278 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 CAPZA1P52907 286 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 PTTG1IPP53801 180 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 SNCBQ16143 134 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 DMRTC1Q5HYR2 192 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 ZNF770Q6IQ21 691 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 KCTD20Q7Z5Y7 419 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 LHFPL4Q7Z7J7 247 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 TIGD4Q8IY51 512 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 ZDHHC23Q8IYP9 409 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 FTMTQ8N4E7 242 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 AQP11Q8NBQ7 271 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 OR4S1Q8NGB4 309 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 OR5D13Q8NGL4 314 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 PIFOQ8TCI5 191 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 R3HDM4Q96D70 268 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 RGCCQ9H4X1 137 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 CCDC134Q9H6E4 229 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 IL1RAPQ9NPH3 570 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 SERTAD4Q9NUC0 356 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 TAS2R1Q9NYW7 299 aa6.3□□□□□ -1.4
SMCHD1-210ENST00000583800 NBEAL2Q6ZNJ1 2754 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 M0QYG6 137 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 RRP9O43818 475 aaKnown RBP6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 CCNB2O95067 398 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 BAG2O95816 211 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 RAP2AP10114 183 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 HSD17B1P14061 328 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 CCL3L1P16619 93 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 CEBPDP49716 269 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 RAB13P51153 203 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 BLVRAP53004 296 aa6.29□□□□□ -1.4
SMCHD1-210ENST00000583800 RPP30P78346 268 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms