RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	TPRA1	Q86W33	373 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	KRTAP1-3	Q8IUG1	177 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	PXT1	Q8NFP0	134 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RAB39B	Q96DA2	213 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NRIP2	Q9BQI9	281 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	METTL9	Q9H1A3	318 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	PPIL3	Q9H2H8	161 aa	Known RBP	12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	PLGRKT	Q9HBL7	147 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	DCAF16	Q9NXF7	216 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ING4	Q9UNL4	249 aa		12.51	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RNF223	E7ERA6	249 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ZNF205	O95201	554 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CSTB	P04080	98 aa	Known RBP	12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RAB3B	P20337	219 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ALDH3B2	P48448	385 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	MTNR1B	P49286	362 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ZP1	P60852	638 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	LOXL1	Q08397	574 aa	Predicted RBP	12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ZNF404	Q494X3	552 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	TEX36	Q5VZQ5	186 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	AWAT2	Q6E213	333 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SPNS3	Q6ZMD2	512 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	DCDC5	Q6ZRR9	648 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NLRC3	Q7RTR2	1065 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	EMG1	Q92979	244 aa	Known RBP	12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	FUNDC2	Q9BWH2	189 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	TMEM165	Q9HC07	324 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	MTCH1	Q9NZJ7	389 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NLK	Q9UBE8	527 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	GHRL	Q9UBU3	117 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	MIOX	Q9UGB7	285 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	MRPS28	Q9Y2Q9	187 aa	Known RBP	12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	AK6	Q9Y3D8	172 aa	Known RBP	12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499		V9GY05	133 aa		12.5	□□□□□ -0.41
KLHDC4-223	ENST00000568499	DYSF	O75923	2080 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NKX6-3	A6NJ46	265 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ANGPTL7	O43827	346 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NOL3	O60936	208 aa	Known RBP	12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	KDM4B	O94953	1096 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	UBB	P0CG47	229 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	EGR1	P18146	543 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	OR3A4P	P47883	348 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	FAM201A	Q5SY85	155 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ACP7	Q6ZNF0	438 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SLC36A1	Q7Z2H8	476 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	FAM58A	Q8N1B3	248 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	OR6M1	Q8NGM8	313 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ZNF488	Q96MN9	340 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	TMEM246	Q9BRR3	403 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	DNTTIP1	Q9H147	329 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NARFL	Q9H6Q4	476 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CNTD2	Q9H8S5	307 aa		12.49	□□□□□ -0.41
KLHDC4-223	ENST00000568499	IGHV3OR15-7	A0A075B7D8	119 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	OR2AT4	A6NND4	320 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	WNT9B	O14905	357 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	KNG1	P01042	644 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	GYPA	P02724	150 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RPS2	P15880	293 aa	Known RBP	12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	PRKACA	P17612	351 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ADRA2C	P18825	462 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	BCL3	P20749	454 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	HTR2C	P28335	458 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	GABRA2	P47869	451 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CAPZA1	P52907	286 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ERVK11-1	P61568	191 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RAB11B	Q15907	218 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	GPR107	Q5VW38	600 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	GLIPR1L1	Q6UWM5	242 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ASCL4	Q6XD76	172 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ANKRD13B	Q86YJ7	626 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	C19orf18	Q8NEA5	215 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	OR8B3	Q8NGG8	313 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	TBC1D15	Q8TC07	691 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	MED30	Q96HR3	178 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	OR8B2	Q96RD0	313 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CENPO	Q9BU64	300 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	WDR13	Q9H1Z4	485 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	HES4	Q9HCC6	221 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	IL36G	Q9NZH8	169 aa		12.48	□□□□□ -0.41
KLHDC4-223	ENST00000568499	IGHV4-61	A0A0C4DH41	118 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CEACAM18	A8MTB9	384 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499		H7C1Q1	480 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ADAM20	O43506	726 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CDRT1	O95170	752 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	HTR3B	O95264	441 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	GTF2F2	P13984	249 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NPBWR2	P48146	333 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	SPIN3	Q5JUX0	258 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	C1orf100	Q5SVJ3	147 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ELP2	Q6IA86	826 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CLDND2	Q8NHS1	167 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	MRPS24	Q96EL2	167 aa	Known RBP	12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	NEIL1	Q96FI4	390 aa	Predicted RBP	12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	CST11	Q9H112	138 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	ZNF665	Q9H7R5	613 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	PATZ1	Q9HBE1	687 aa	Known RBP	12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	HMG20A	Q9NP66	347 aa		12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	RBFOX1	Q9NWB1	397 aa	Known RBP	12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	PRRC2A	P48634	2157 aa	Known RBP	12.47	□□□□□ -0.41
KLHDC4-223	ENST00000568499	TANC2	Q9HCD6	1990 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms