RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 GLS2Q9UI32 602 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 FOXJ3Q9UPW0 622 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 DOCK11Q5JSL3 2073 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 NDUFB3O43676 98 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 SYNGR1O43759 233 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 HSMCR30P0CW71 290 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 CPEP16870 476 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 EGR1P18146 543 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 ERVK11-1P61568 191 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 RPS11P62280 158 aaKnown RBP eCLIP10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 LCN2P80188 198 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 SCGB2A2Q13296 93 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 DOC2BQ14184 412 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 KISS1Q15726 138 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 DMRTC1Q5HYR2 192 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 DCAF12L2Q5VW00 463 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 WDR25Q64LD2 544 aaPredicted RBP10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 STUMQ69YW2 141 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 BTNL3Q6UXE8 466 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 UNQ9370/PRO34162Q6UXP9 181 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF841Q6ZN19 808 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 ACP7Q6ZNF0 438 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 SLC25A26Q70HW3 274 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF367Q7RTV3 350 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 CALHM1Q8IU99 346 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 ZFP41Q8N8Y5 198 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 PNLDC1Q8NA58 520 aaKnown RBP10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 ANGPTL6Q8NI99 470 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 RGP1Q92546 391 aaPredicted RBP10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 BEX2Q9BXY8 128 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 SHARPINQ9H0F6 387 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 HES4Q9HCC6 221 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 ACOT13Q9NPJ3 140 aa10.5□□□□□ -0.73
SHCBP1-204ENST00000565887 IGKV1-27A0A075B6S5 117 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 LOC105371242A0A075B767 164 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 TRBV5-7A0A0A0MS05 114 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 KIR2DS1A0A191URI9 304 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 PNMA8CA0A1B0GUJ8 204 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 KNG1P01042 644 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 PSG2P11465 335 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 FSTP19883 344 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 BDKRB2P30411 391 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 PRDX2P32119 198 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 IL13RA1P78552 427 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 EMX1Q04741 257 aaPredicted RBP10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 CHRFAM7AQ494W8 412 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 KCTD21Q4G0X4 260 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 ACSM3Q53FZ2 586 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 FAHD2BQ6P2I3 314 aaPredicted RBP10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 LYPD2Q6UXB3 125 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF788Q6ZQV5 615 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 Q71RC1 249 aaPredicted RBP10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF561Q8N587 486 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 C19orf18Q8NEA5 215 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 PXT1Q8NFP0 134 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 TBC1D15Q8TC07 691 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 RAB40AQ8WXH6 277 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 SGCDQ92629 289 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 SDSLQ96GA7 329 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 FAHD2AQ96GK7 314 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 GPER1Q99527 375 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 WDR13Q9H1Z4 485 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 MTCH1Q9NZJ7 389 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 MALRD1Q5VYJ5 2156 aa10.49□□□□□ -0.73
SHCBP1-204ENST00000565887 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 IGHV3OR15-7A0A075B7D8 119 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 RFPL4AA6NLU0 287 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 RFPL4AL1F8VTS6 287 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 SIGLEC5O15389 551 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 ENSAO43768 121 aaKnown RBP10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 CRLF1O75462 422 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 CHRM2P08172 466 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 PPIAL4GP0DN37 164 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 TMEM225BP0DP42 221 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 IGFBP3P17936 291 aaPredicted RBP10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 ZFP36P26651 326 aaKnown RBP10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF93P35789 620 aaPredicted RBP10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 GABRA2P47869 451 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 POU3F4P49335 361 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 CAV3P56539 151 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 GPR176Q14439 515 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 CR1LQ2VPA4 569 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 SPIN3Q5JUX0 258 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 LIPKQ5VXJ0 399 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF773Q6PK81 442 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 SATL1Q86VE3 508 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 SPARTQ8N0X7 666 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 FAM58AQ8N1B3 248 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 OR5D13Q8NGL4 314 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 FOXRED1Q96CU9 486 aaPredicted RBP10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 DERL3Q96Q80 235 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 OR14A2Q96R54 314 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 S100A13Q99584 98 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 CCL13Q99616 98 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 MRI1Q9BV20 369 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 FAM234AQ9H0X4 552 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 SLITRK2Q9H156 845 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 LPAR2Q9HBW0 351 aa10.48□□□□□ -0.73
SHCBP1-204ENST00000565887 TAS2R4Q9NYW5 299 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms