RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 NKX6-2Q9C056 277 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-216ENST00000559819 TCFL5Q9UL49 500 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 KIAA1549Q9HCM3 1950 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 ATP6V1G2-DDX39BF2Z307 99 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 FAM157CP0CG43 387 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 OR5H8P0DN80 308 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 GLI4P10075 376 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF708P17019 499 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 FXYD4P59646 89 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 SPEM2Q0P670 501 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 SCRN3Q0VDG4 424 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 GUCA2BQ16661 112 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 TSPO2Q5TGU0 170 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 C9orf135Q5VTT2 229 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 SKA3Q8IX90 412 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 OR4A4PQ8NGN8 299 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 CPT1CQ8TCG5 803 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 SGCZQ96LD1 299 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 AQP10Q96PS8 301 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 CMSS1Q9BQ75 279 aaKnown RBP8.72□□□□□ -1.01
LRRC28-216ENST00000559819 OR2H1Q9GZK4 316 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 TMEM100Q9NV29 134 aa8.72□□□□□ -1.01
LRRC28-216ENST00000559819 ARID1AO14497 2285 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 TMEM218A2RU14 115 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF850A8MQ14 1090 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF705EA8MWA4 302 aaPredicted RBP8.71□□□□□ -1.01
LRRC28-216ENST00000559819 RRP8O43159 456 aaKnown RBP8.71□□□□□ -1.01
LRRC28-216ENST00000559819 CER1O95813 267 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 SCGB1D2O95969 90 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.01
LRRC28-216ENST00000559819 NRASP01111 189 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 FCGR3AP08637 254 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 HKR1P10072 659 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 GDF1P27539 372 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 RBP2P50120 134 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF169Q14929 603 aaPredicted RBP8.71□□□□□ -1.01
LRRC28-216ENST00000559819 CNN3Q15417 329 aaKnown RBP8.71□□□□□ -1.01
LRRC28-216ENST00000559819 ACER2Q5QJU3 275 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 GGNBP1Q5YKI7 109 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 ABLIM2Q6H8Q1 611 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 SPINK14Q6IE38 97 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 CLEC9AQ6UXN8 241 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 C5orf24Q7Z6I8 188 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 FBXL14Q8N1E6 418 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 KCNE4Q8WWG9 221 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 PIGCQ92535 297 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 SPSB1Q96BD6 273 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 SLC6A15Q9H2J7 730 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 GPR35Q9HC97 309 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 ZC4H2Q9NQZ6 224 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 C1orf123Q9NWV4 160 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 PADI1Q9ULC6 663 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 LHX6Q9UPM6 363 aa8.71□□□□□ -1.01
LRRC28-216ENST00000559819 LSM5Q9Y4Y9 91 aaKnown RBP8.71□□□□□ -1.01
LRRC28-216ENST00000559819 CRYM-AS1A6NIL9 109 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 CA11O75493 328 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 CTSDP07339 412 aaPredicted RBP8.71□□□□□ -1.02
LRRC28-216ENST00000559819 CHATP28329 748 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 FAM3AP98173 230 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 NAAAQ02083 359 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 SRYQ05066 204 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 SURF2Q15527 256 aaPredicted RBP8.71□□□□□ -1.02
LRRC28-216ENST00000559819 PEAR1Q5VY43 1037 aaPredicted RBP8.71□□□□□ -1.02
LRRC28-216ENST00000559819 PLCXD3Q63HM9 321 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 SLC22A25Q6T423 547 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 SGPP2Q8IWX5 399 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 CCDC36Q8IYA8 594 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 OR10AD1Q8NGE0 317 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 RNF141Q8WVD5 230 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 SMIM3Q9BZL3 60 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 FAM96BQ9Y3D0 163 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 LOXL2Q9Y4K0 774 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 MUC3AQ02505 3323 aa8.71□□□□□ -1.02
LRRC28-216ENST00000559819 hCG_38984A0A1B0GV85 526 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 RAB19A4D1S5 217 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 TOR1AO14656 332 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 LRP3O75074 770 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 ATG12O94817 140 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 EDN3P14138 238 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 PIGPP57054 158 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 PPA1Q15181 289 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 KRTAP27-1Q3LI81 207 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 PHLDA2Q53GA4 152 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 Q6ZPA2 131 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 PUSL1Q8N0Z8 303 aaKnown RBP8.7□□□□□ -1.02
LRRC28-216ENST00000559819 FNDC9Q8TBE3 224 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 BSCL2Q96G97 398 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-216ENST00000559819 CNTNAP3BQ96NU0 1288 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 TSNAXQ99598 290 aaKnown RBP8.7□□□□□ -1.02
LRRC28-216ENST00000559819 CNTNAP3Q9BZ76 1288 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 HRH4Q9H3N8 390 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 CRIM1Q9NZV1 1036 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 TIMM10BQ9Y5J6 103 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 COL6A3P12111 3177 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 TERTO14746 1132 aaKnown RBP8.7□□□□□ -1.02
LRRC28-216ENST00000559819 DNPH1O43598 174 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 CELA3AP09093 270 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 NME2P22392 152 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms