RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ODF4Q2M2E3 257 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 TMEM200BQ69YZ2 307 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 KDM4DQ6B0I6 523 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 SLC35E4Q6ICL7 350 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 BATF2Q8N1L9 274 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 ASCC1Q8N9N2 400 aaKnown RBP11.92□□□□□ -0.5
SHMT2-235ENST00000557740 OR4M1Q8NGD0 313 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 OR14K1Q8NGZ2 314 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 OR2T27Q8NH04 317 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 TRMT10AQ8TBZ6 339 aaKnown RBP11.92□□□□□ -0.5
SHMT2-235ENST00000557740 RORBQ92753 470 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 GABARAPL1Q9H0R8 117 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 RAB18Q9NP72 206 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 WARS2Q9UGM6 360 aaKnown RBP11.92□□□□□ -0.5
SHMT2-235ENST00000557740 SLC7A11Q9UPY5 501 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 VWFP04275 2813 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 FAM230AA0A1W2PPH8 454 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 A6NIN4 97 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 PIPP12273 146 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-235ENST00000557740 FCGR1AP12314 374 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 BMXP51813 675 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 ERVFRD-1P60508 538 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 AANATQ16613 207 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 Q6ZTK2 550 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 ANGPTL5Q86XS5 388 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 PKIBQ9C010 78 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 HES4Q9HCC6 221 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 FBLN5Q9UBX5 448 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 SLC22A13Q9Y226 551 aa11.91□□□□□ -0.5
SHMT2-235ENST00000557740 SYT7O43581 403 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 TK1P04183 234 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 CSF1P09603 554 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 CCL3L1P16619 93 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 CCL1P22362 96 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 ATP6V1E1P36543 226 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 EFNB1P98172 346 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 IL24Q13007 206 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 ZNF273Q14593 569 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 C1orf146Q5VVC0 180 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 C11orf88Q6PI97 169 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 ZNF782Q6ZMW2 699 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-235ENST00000557740 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 SSX6Q7RTT6 188 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 AMIGO2Q86SJ2 522 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 CALHM1Q8IU99 346 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 OR10H4Q8NGA5 316 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 FAM110DQ8TAY7 271 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-235ENST00000557740 AJUBAQ96IF1 538 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 CIB1Q99828 191 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 ADI1Q9BV57 179 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 NPFFR1Q9GZQ6 430 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 MEGF9Q9H1U4 602 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 SIGLEC9Q9Y336 463 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 AP4S1Q9Y587 144 aa11.9□□□□□ -0.5
SHMT2-235ENST00000557740 A0A1W2PQL4 384 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-235ENST00000557740 METTL15A6NJ78 407 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 H3BSH0 61 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 GATBO75879 557 aaKnown RBP11.89□□□□□ -0.51
SHMT2-235ENST00000557740 APOL3O95236 402 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 OR2T7P0C7T2 308 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 HTR1FP30939 366 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 RASSF2P50749 326 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 EDDM3BP56851 147 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 ERVK11-1P61568 191 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 COL10A1Q03692 680 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 BNIP1Q12981 228 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 HERPUD1Q15011 391 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 Q6ZSR3 168 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 FAM220AQ7Z4H9 259 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 CATSPERDQ86XM0 798 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 OR2T6Q8NHC8 308 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 PPP1R35Q8TAP8 253 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 CEP19Q96LK0 163 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 CHST5Q9GZS9 411 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 RIBC2Q9H4K1 309 aa11.89□□□□□ -0.51
SHMT2-235ENST00000557740 RANBP3Q9H6Z4 567 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-235ENST00000557740 LOC107986453A0A1B0GWG9 222 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 K7N7A8 449 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 SULT1C4O75897 302 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 CHRM2P08172 466 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 PAX6P26367 422 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 CNN3Q15417 329 aaKnown RBP11.88□□□□□ -0.51
SHMT2-235ENST00000557740 GDPD3Q7L5L3 318 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 C11orf42Q8N5U0 333 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 DTX3Q8N9I9 347 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 CCDC54Q8NEL0 328 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 OR8J1Q8NGP2 316 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 OR13D1Q8NGV5 346 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 SLAMF9Q96A28 289 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 FOXRED1Q96CU9 486 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-235ENST00000557740 BORCS8Q96FH0 119 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 NKX3-1Q99801 234 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-235ENST00000557740 TGP01266 2768 aa11.88□□□□□ -0.51
SHMT2-235ENST00000557740 INMTO95050 263 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 SERPINA3P01011 423 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 ARG1P05089 322 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 ZNF728P0DKX0 622 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 KIR2DS4P43632 304 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 FUT6P51993 359 aa11.87□□□□□ -0.51
SHMT2-235ENST00000557740 EFNB2P52799 333 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms