RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 C11orf42Q8N5U0 333 aa18.39■□□□□ 0.53
ACTN1-220ENST00000556433 YIPF7Q8N8F6 280 aa18.39■□□□□ 0.53
ACTN1-220ENST00000556433 TBX5Q99593 518 aa18.39■□□□□ 0.53
ACTN1-220ENST00000556433 USE1Q9NZ43 259 aa18.39■□□□□ 0.53
ACTN1-220ENST00000556433 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.39■□□□□ 0.53
ACTN1-220ENST00000556433 DHRS7CA6NNS2 312 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 DYNC1I1O14576 645 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 TSPAN15O95858 294 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 KRT8P05787 483 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 CCL3L1P16619 93 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 MPZP25189 248 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 PAX6P26367 422 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 ERVFRD-1P60508 538 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 ODF4Q2M2E3 257 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 Q6ZSR3 168 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 SSX6Q7RTT6 188 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 AMIGO2Q86SJ2 522 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 CALHM1Q8IU99 346 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 PPP1R35Q8TAP8 253 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 FAM110DQ8TAY7 271 aaPredicted RBP18.38■□□□□ 0.53
ACTN1-220ENST00000556433 TRMT10AQ8TBZ6 339 aaKnown RBP18.38■□□□□ 0.53
ACTN1-220ENST00000556433 HES4Q9HCC6 221 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 WARS2Q9UGM6 360 aaKnown RBP18.38■□□□□ 0.53
ACTN1-220ENST00000556433 SIGLEC9Q9Y336 463 aa18.38■□□□□ 0.53
ACTN1-220ENST00000556433 FAM230AA0A1W2PPH8 454 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 TK1P04183 234 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 COX7A1P24310 79 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 LGALS4P56470 323 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 AANATQ16613 207 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 PKIBQ9C010 78 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 ENOPH1Q9UHY7 261 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 SLC7A11Q9UPY5 501 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 AP4S1Q9Y587 144 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 NOTCH1P46531 2555 aa18.37■□□□□ 0.53
ACTN1-220ENST00000556433 VWFP04275 2813 aa18.36■□□□□ 0.53
ACTN1-220ENST00000556433 H3BSH0 61 aa18.36■□□□□ 0.53
ACTN1-220ENST00000556433 PIPP12273 146 aaPredicted RBP18.36■□□□□ 0.53
ACTN1-220ENST00000556433 CCL1P22362 96 aa18.36■□□□□ 0.53
ACTN1-220ENST00000556433 ERVK11-1P61568 191 aa18.36■□□□□ 0.53
ACTN1-220ENST00000556433 BNIP1Q12981 228 aa18.36■□□□□ 0.53
ACTN1-220ENST00000556433 IL24Q13007 206 aa18.36■□□□□ 0.53
ACTN1-220ENST00000556433 ZNF273Q14593 569 aa18.36■□□□□ 0.53
ACTN1-220ENST00000556433 GABARAPL1Q9H0R8 117 aa18.36■□□□□ 0.53
ACTN1-220ENST00000556433 A0A1W2PQL4 384 aaPredicted RBP18.35■□□□□ 0.53
ACTN1-220ENST00000556433 METTL15A6NJ78 407 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 SYT7O43581 403 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 OR2T7P0C7T2 308 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 POLR2IP36954 125 aaKnown RBP18.35■□□□□ 0.53
ACTN1-220ENST00000556433 KIR2DS4P43632 304 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 BMXP51813 675 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 COL10A1Q03692 680 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 C2orf68Q2NKX9 166 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 ZNF782Q6ZMW2 699 aaPredicted RBP18.35■□□□□ 0.53
ACTN1-220ENST00000556433 CATSPERDQ86XM0 798 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 OR4C13Q8NGP0 309 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 CIB1Q99828 191 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 ADI1Q9BV57 179 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 PLEKHA1Q9HB21 404 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 RAB18Q9NP72 206 aa18.35■□□□□ 0.53
ACTN1-220ENST00000556433 K7N7A8 449 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 APOL3O95236 402 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 CSF1P09603 554 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 HTR1FP30939 366 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 ATP6V1E1P36543 226 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 HERPUD1Q15011 391 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 UBE2V2Q15819 145 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 CRIP3Q6Q6R5 217 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 Q6ZTK2 550 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 ASCC1Q8N9N2 400 aaKnown RBP18.34■□□□□ 0.53
ACTN1-220ENST00000556433 OR10H4Q8NGA5 316 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 FAM53CQ9NYF3 392 aa18.34■□□□□ 0.53
ACTN1-220ENST00000556433 C17orf98A8MV24 154 aa18.33■□□□□ 0.52
ACTN1-220ENST00000556433 INMTO95050 263 aa18.33■□□□□ 0.52
ACTN1-220ENST00000556433 CHRM2P08172 466 aa18.33■□□□□ 0.52
ACTN1-220ENST00000556433 RASSF2P50749 326 aa18.33■□□□□ 0.52
ACTN1-220ENST00000556433 C1orf146Q5VVC0 180 aa18.33■□□□□ 0.52
ACTN1-220ENST00000556433 CEP19Q96LK0 163 aa18.33■□□□□ 0.52
ACTN1-220ENST00000556433 MTCH1Q9NZJ7 389 aa18.33■□□□□ 0.52
ACTN1-220ENST00000556433 F8VVB4 439 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 F8VWA3 439 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 GATBO75879 557 aaKnown RBP18.32■□□□□ 0.52
ACTN1-220ENST00000556433 SULT1C4O75897 302 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 SERPINA3P01011 423 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 FCGR1AP12314 374 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 FUT6P51993 359 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 EFNB2P52799 333 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 DLX6P56179 175 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 C11orf88Q6PI97 169 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 LHFPL4Q7Z7J7 247 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 OR2T6Q8NHC8 308 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 PIFOQ8TCI5 191 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 SLAMF9Q96A28 289 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 RIBC2Q9H4K1 309 aa18.32■□□□□ 0.52
ACTN1-220ENST00000556433 RANBP3Q9H6Z4 567 aaPredicted RBP18.32■□□□□ 0.52
ACTN1-220ENST00000556433 IGKV1-27A0A075B6S5 117 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 MEX3AA1L020 520 aaKnown RBP18.31■□□□□ 0.52
ACTN1-220ENST00000556433 EDDM3BP56851 147 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 SLC25A26Q70HW3 274 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 GDPD3Q7L5L3 318 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 C1QL4Q86Z23 238 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms