RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GAL3ST1Q99999 423 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 REG4Q9BYZ8 158 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 FAM192AQ9GZU8 254 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 METTL9Q9H1A3 318 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 OR51E2Q9H255 320 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 PLGRKTQ9HBL7 147 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 SMURF1Q9HCE7 757 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 TXNL4BQ9NX01 149 aaKnown RBP6.42□□□□□ -1.38
TDP1-214ENST00000556063 GHRLQ9UBU3 117 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 MIOXQ9UGB7 285 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 GLS2Q9UI32 602 aa6.42□□□□□ -1.38
TDP1-214ENST00000556063 SETXQ7Z333 2677 aaKnown RBP6.41□□□□□ -1.38
TDP1-214ENST00000556063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.41□□□□□ -1.381e-9■■■■■ 36.7
TDP1-214ENST00000556063 NKX6-3A6NJ46 265 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 C3orf80F5H4A9 247 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 H3BUI4 141 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 SPRY1O43609 319 aaPredicted RBP6.41□□□□□ -1.38
TDP1-214ENST00000556063 NOL3O60936 208 aaKnown RBP6.41□□□□□ -1.38
TDP1-214ENST00000556063 KDM4BO94953 1096 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 IGHV2-70P01814 119 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 TFAP2AP05549 437 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 UBBP0CG47 229 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 RAB3BP20337 219 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 CD80P33681 288 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 ALDH3B2P48448 385 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 MTNR1BP49286 362 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 GMFBP60983 142 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 LOXL1Q08397 574 aaPredicted RBP6.41□□□□□ -1.38
TDP1-214ENST00000556063 ZMYND11Q15326 602 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 RSU1Q15404 277 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 TEX36Q5VZQ5 186 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 AWAT2Q6E213 333 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 SFRP4Q6FHJ7 346 aaPredicted RBP6.41□□□□□ -1.38
TDP1-214ENST00000556063 SPNS3Q6ZMD2 512 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 DCDC5Q6ZRR9 648 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 SLC36A1Q7Z2H8 476 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 LRRTM1Q86UE6 522 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 TGIF2LYQ8IUE0 185 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 FAM58AQ8N1B3 248 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 WFDC11Q8NEX6 87 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 OR6M1Q8NGM8 313 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 EMG1Q92979 244 aaKnown RBP6.41□□□□□ -1.38
TDP1-214ENST00000556063 SLAMF9Q96A28 289 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 MED30Q96HR3 178 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 NRIP2Q9BQI9 281 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 FUNDC2Q9BWH2 189 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 DNTTIP1Q9H147 329 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 TMEM165Q9HC07 324 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 DCAF16Q9NXF7 216 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 NLKQ9UBE8 527 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 ING4Q9UNL4 249 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 MRPS28Q9Y2Q9 187 aaKnown RBP6.41□□□□□ -1.38
TDP1-214ENST00000556063 AK6Q9Y3D8 172 aaKnown RBP6.41□□□□□ -1.38
TDP1-214ENST00000556063 V9GY05 133 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 DCHS2Q6V1P9 2916 aa6.41□□□□□ -1.38
TDP1-214ENST00000556063 OR2AT4A6NND4 320 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 RNF223E7ERA6 249 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 SLC17A2O00624 439 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ADAM20O43506 726 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ANGPTL7O43827 346 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 TMEM127O75204 238 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ZNF205O95201 554 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 HTR3BO95264 441 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 KNG1P01042 644 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 RPS2P15880 293 aaKnown RBP6.4□□□□□ -1.38
TDP1-214ENST00000556063 EGR1P18146 543 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ADRA2CP18825 462 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 HTR2CP28335 458 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 OR3A4PP47883 348 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ZP1P60852 638 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ERVK11-1P61568 191 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 FAM189A2Q15884 450 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 RAB11BQ15907 218 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ZNF404Q494X3 552 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 SLC22A6Q4U2R8 563 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 SPIN3Q5JUX0 258 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 C1orf100Q5SVJ3 147 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 FAM201AQ5SY85 155 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 GPR107Q5VW38 600 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ELP2Q6IA86 826 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ASCL4Q6XD76 172 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ACP7Q6ZNF0 438 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ANKRD13BQ86YJ7 626 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 KRTAP1-3Q8IUG1 177 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 CROCCP3Q8IVE0 287 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 OR8B3Q8NGG8 313 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 PPP1R35Q8TAP8 253 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 TBC1D15Q8TC07 691 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 MRPS24Q96EL2 167 aaKnown RBP6.4□□□□□ -1.38
TDP1-214ENST00000556063 NEIL1Q96FI4 390 aaPredicted RBP6.4□□□□□ -1.38
TDP1-214ENST00000556063 OR8B2Q96RD0 313 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 BCL7BQ9BQE9 202 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 TMEM246Q9BRR3 403 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 CST11Q9H112 138 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 WDR13Q9H1Z4 485 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 PPIL3Q9H2H8 161 aaKnown RBP6.4□□□□□ -1.38
TDP1-214ENST00000556063 NARFLQ9H6Q4 476 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ZNF665Q9H7R5 613 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 CNTD2Q9H8S5 307 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 PATZ1Q9HBE1 687 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms