RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PGA5P0DJD9 388 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 RAB3AP20336 220 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 MPZP25189 248 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 GABRA2P47869 451 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 SEC61A1P61619 476 aaKnown RBP8.85□□□□□ -0.99
PTCH1-225ENST00000551845 GPR50Q13585 617 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 C11orf91Q3C1V1 193 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 Q499Y3 187 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 WDR25Q64LD2 544 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-225ENST00000551845 BTNL3Q6UXE8 466 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 ZNF841Q6ZN19 808 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 SLC25A26Q70HW3 274 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 PRSS48Q7RTY5 328 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 MS4A15Q8N5U1 240 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 ZFP41Q8N8Y5 198 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 POC1AQ8NBT0 407 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 RAB40AQ8WXH6 277 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 TMEM106AQ96A25 262 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 SEH1LQ96EE3 360 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 OPALINQ96PE5 141 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 C7orf69Q9H7B7 122 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 MMP26Q9NRE1 261 aa8.85□□□□□ -0.99
PTCH1-225ENST00000551845 PAK1IP1Q9NWT1 392 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-225ENST00000551845 DYSFO75923 2080 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 IGKV1-27A0A075B6S5 117 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 LOC105371242A0A075B767 164 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 KIR2DS1A0A191URI9 304 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 PNMA8CA0A1B0GUJ8 204 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 A8MXK9 166 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 TRAPPC2LH3BP13 241 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-225ENST00000551845 DVL1O14640 695 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 SULT1B1O43704 296 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 MRPS14O60783 128 aaKnown RBP8.84□□□□□ -0.99
PTCH1-225ENST00000551845 INMTO95050 263 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 NXPH2O95156 264 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 ECDO95905 644 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-225ENST00000551845 PLATP00750 562 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 LIPFP07098 398 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 HCKP08631 526 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 PSG2P11465 335 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 SRP14P37108 136 aaKnown RBP8.84□□□□□ -0.99
PTCH1-225ENST00000551845 PDZK1IP1Q13113 114 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 IRF3Q14653 427 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 SMIM21Q3B7S5 101 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 LRRC10Q5BKY1 277 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 ACP7Q6ZNF0 438 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 ANGPTL6Q8NI99 470 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 SGCDQ92629 289 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 CPNE2Q96FN4 548 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-225ENST00000551845 CEP19Q96LK0 163 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 ZNF488Q96MN9 340 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 OR5M11Q96RB7 305 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 NRIP2Q9BQI9 281 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 MTCH1Q9NZJ7 389 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 CKLFQ9UBR5 152 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 INSIG2Q9Y5U4 225 aa8.84□□□□□ -0.99
PTCH1-225ENST00000551845 TRBV5-5A0A0J9YX44 114 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 NKX6-3A6NJ46 265 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 RFPL4AA6NLU0 287 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 RFPL4AL1F8VTS6 287 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 ALDOBP05062 364 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 HSMCR30P0CW71 290 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 TMEM225BP0DP42 221 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 AMY2BP19961 511 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 PRDX2P32119 198 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 TGFBR2P37173 567 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 POU3F4P49335 361 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 ERVK11-1P61568 191 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 PPP3R1P63098 170 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 IL13RA1P78552 427 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 KISS1Q15726 138 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 STUMQ69YW2 141 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 ZNF788Q6ZQV5 615 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 SATL1Q86VE3 508 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 Q8IYB0 196 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 RGP1Q92546 391 aaPredicted RBP8.83□□□□□ -1
PTCH1-225ENST00000551845 THRSPQ92748 146 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 SLAMF9Q96A28 289 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 PGLYRP3Q96LB9 341 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 GPER1Q99527 375 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 MRI1Q9BV20 369 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 ISYNA1Q9NPH2 558 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 TMEM138Q9NPI0 162 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 TAS2R4Q9NYW5 299 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 CTSZQ9UBR2 303 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 LRRC42Q9Y546 428 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 AUP1Q9Y679 476 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 ABCA1O95477 2261 aa8.83□□□□□ -1
PTCH1-225ENST00000551845 A0A1W2PPK0 400 aa8.82□□□□□ -1
PTCH1-225ENST00000551845 ZNF879B4DU55 563 aa8.82□□□□□ -1
PTCH1-225ENST00000551845 SPRY1O43609 319 aaPredicted RBP8.82□□□□□ -1
PTCH1-225ENST00000551845 ENSAO43768 121 aaKnown RBP8.82□□□□□ -1
PTCH1-225ENST00000551845 GPX5O75715 221 aa8.82□□□□□ -1
PTCH1-225ENST00000551845 CHRM2P08172 466 aa8.82□□□□□ -1
PTCH1-225ENST00000551845 FAM157CP0CG43 387 aa8.82□□□□□ -1
PTCH1-225ENST00000551845 SRD5A1P18405 259 aa8.82□□□□□ -1
PTCH1-225ENST00000551845 MAPK3P27361 379 aaPredicted RBP8.82□□□□□ -1
PTCH1-225ENST00000551845 BDKRB2P30411 391 aa8.82□□□□□ -1
PTCH1-225ENST00000551845 RPS11P62280 158 aaKnown RBP eCLIP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms