RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CHRFAM7AQ494W8 412 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 AVPI1Q5T686 147 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 YRDCQ86U90 279 aaKnown RBP9.71□□□□□ -0.86
LINC00661-204ENST00000549354 SLAMF9Q96A28 289 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 ALKBH3Q96Q83 286 aaPredicted RBP9.71□□□□□ -0.86
LINC00661-204ENST00000549354 SULT4A1Q9BR01 284 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 TAF9BQ9HBM6 251 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 ZNF160Q9HCG1 818 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 CHST11Q9NPF2 352 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 B3GALT5Q9Y2C3 310 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 CCDC187A0A096LP49 1063 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 TPPPO94811 219 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 OR8U9P0C7N5 309 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM50BP56557 158 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM128Q5BJH2 165 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 RPS19BP1Q86WX3 136 aaKnown RBP9.7□□□□□ -0.86
LINC00661-204ENST00000549354 C17orf78Q8N4C9 275 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 OR5L1Q8NGL2 311 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 OR10S1Q8NGN2 331 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 OR8U1Q8NH10 309 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 AKR7LQ8NHP1 331 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 CD300LFQ8TDQ1 290 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 NEK7Q8TDX7 302 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 SFT2D1Q8WV19 159 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 SGK3Q96BR1 496 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 ZNF385AQ96PM9 386 aaKnown RBP9.7□□□□□ -0.86
LINC00661-204ENST00000549354 FAAP24Q9BTP7 215 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 LPAR5Q9H1C0 372 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM9BQ9NQ34 198 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 BIN3Q9NQY0 253 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 ZFP57Q9NU63 452 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 ACACAQ13085 2346 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 COL12A1Q99715 3063 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 PCSK5Q92824 1860 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 TRBV23-1A0A0A0MS06 115 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 TRAV20A0A0B4J274 112 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 A6NIZ1 184 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 RNASEK-C17orf49H0YIS7 233 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 KALRNO60229 2985 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 MT-CO3P00414 261 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 ARG1P05089 322 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 MEOX2P50222 304 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 P2RY4P51582 365 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 RAP1BP61224 184 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 RAP1AP62834 184 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 Q0VFX4 171 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 CLINT1Q14677 625 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 IAH1Q2TAA2 248 aaPredicted RBP9.7□□□□□ -0.86
LINC00661-204ENST00000549354 FDX2Q6P4F2 183 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 GLYATL2Q8WU03 294 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 SLC25A43Q8WUT9 341 aaPredicted RBP9.7□□□□□ -0.86
LINC00661-204ENST00000549354 ASB10Q8WXI3 467 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 IP6K3Q96PC2 410 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 SPOCK3Q9BQ16 436 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 NRIP2Q9BQI9 281 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 NAA11Q9BSU3 229 aaPredicted RBP9.7□□□□□ -0.86
LINC00661-204ENST00000549354 MAGT1Q9H0U3 335 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 PLEKHJ1Q9NW61 149 aa9.7□□□□□ -0.86
LINC00661-204ENST00000549354 LOC102725191A0A1B0GVB3 256 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 SSBP1Q04837 148 aaKnown RBP9.69□□□□□ -0.86
LINC00661-204ENST00000549354 PJVKQ0ZLH3 352 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 Q6ZRG5 221 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 PIP4P1Q86T03 277 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM156Q8N614 296 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 LPAR3Q9UBY5 353 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 PISDQ9UG56 409 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 ARFGEF3Q5TH69 2177 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 ARPC4-TTLL3A0A0A6YYG9 625 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 TRAV39A0A0B4J263 110 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 A0A1W2PPE3 182 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 RAB19A4D1S5 217 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 LINC00587B1AMM8 73 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 FAM157CP0CG43 387 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 TCN2P20062 427 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 CBX5P45973 191 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 SUPT4H1P63272 117 aaKnown RBP9.69□□□□□ -0.86
LINC00661-204ENST00000549354 GABREP78334 506 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 SMCO1Q147U7 214 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 MST1LQ2TV78 715 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 SPIN3Q5JUX0 258 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 ADAM5Q6NVV9 412 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM217Q8N7C4 229 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 PHYHIPLQ96FC7 376 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 KCNK17Q96T54 332 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 GPR87Q9BY21 358 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 EIF5A2Q9GZV4 153 aaKnown RBP9.69□□□□□ -0.86
LINC00661-204ENST00000549354 NIT2Q9NQR4 276 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 FLVCR1Q9Y5Y0 555 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 URGCP-MRPS24S4R325 110 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 TACC2O95359 2948 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 hCG_1809904A0A1W2PP81 198 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 A0A1W2PR64 198 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 A0A1W2PRV1 198 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 C21orf140B9A014 251 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 LCATP04180 440 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 PLA2G5P39877 138 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 DAP3P51398 398 aaKnown RBP9.69□□□□□ -0.86
LINC00661-204ENST00000549354 C1orf100Q5SVJ3 147 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 DHRS11Q6UWP2 260 aa9.69□□□□□ -0.86
LINC00661-204ENST00000549354 OR13G1Q8NGZ3 307 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms