RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PTP4A3O75365 173 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR5F1O95221 314 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 LYPD3O95274 346 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 IGLV2-14P01704 120 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SNRNP70P08621 437 aaKnown RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR8U8P0C7N1 319 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 PRR23D2P0DMB1 279 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 IGHV4-30-4P0DP06 118 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 IDO1P14902 403 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 AQP1P29972 269 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 IFNA8P32881 189 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 GABRA2P47869 451 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 CDX1P47902 265 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SLC9A3P48764 834 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 POU3F4P49335 361 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SLC7A2P52569 658 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 CAPZA1P52907 286 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 TAS2R41P59536 307 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 HIST1H3AP68431 136 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 ELF3P78545 371 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF92Q03936 586 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 TRAP1Q12931 704 aaKnown RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 DYNC1I2Q13409 638 aaKnown RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SNAPC1Q16533 368 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 ANXA2RQ3ZCQ2 193 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 GTDC1Q4AE62 458 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 LRIF1Q5T3J3 769 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 HIST2H3PS2Q5TEC6 136 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 NANOGP8Q6NSW7 305 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF782Q6ZMW2 699 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-220ENST00000544550 CFAP77Q6ZQR2 320 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 HIST2H3AQ71DI3 136 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF329Q86UD4 541 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 FOXRED2Q8IWF2 684 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 C11orf53Q8IXP5 236 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 DRAM1Q8N682 238 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF781Q8N8C0 355 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SMYD1Q8NB12 490 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR5T2Q8NGG2 359 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR56B2PQ8NGI1 322 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR52N4Q8NGI2 321 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR4C15Q8NGM1 316 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR6Q1Q8NGQ2 317 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 OR2AJ1Q8NGZ0 328 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 PFN4Q8NHR9 129 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SLC26A7Q8TE54 656 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 EME1Q96AY2 570 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF799Q96GE5 643 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 PITX2Q99697 317 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 MICU1Q9BPX6 476 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 PRSS27Q9BQR3 290 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 WFDC6Q9BQY6 131 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 TM2D2Q9BX73 214 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 C1orf21Q9H246 121 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 GHITMQ9H3K2 345 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 C19orf12Q9NSK7 152 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 SNTG1Q9NSN8 517 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 RPS6KA6Q9UK32 745 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 RAP2CQ9Y3L5 183 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 HILPDAQ9Y5L2 63 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
SNHG1-220ENST00000544550 NUPR2A6NF83 97 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SERPINE3A8MV23 424 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 C17orf98A8MV24 154 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 EVPLLA8MZ36 301 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 H7C1C5 153 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 M0QX08 132 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SLC16A7O60669 478 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SLPIP03973 132 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 BPGMP07738 259 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CD14P08571 375 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 FAM106CPP0CH98 169 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 IFI30P13284 250 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CCL3L1P16619 93 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 GLRA1P23415 457 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CFL1P23528 166 aaKnown RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CNTFRP26992 372 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 HTR1DP28221 377 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CRABP1P29762 137 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CASQ1P31415 396 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 MDH1P40925 334 aaKnown RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CENPAP49450 140 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 POLR2JP52435 117 aaKnown RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 ELLP55199 621 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 GMFBP60983 142 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 ABCE1P61221 599 aaKnown RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 LCN6P62502 163 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CSNK2BP67870 215 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 DUSP7Q16829 419 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 RSPO1Q2MKA7 263 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 RFX4Q33E94 735 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SLC36A3Q495N2 470 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 MESTQ5EB52 335 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 CXorf66Q5JRM2 361 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-220ENST00000544550 AGBL2Q5U5Z8 902 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 LCN8Q6JVE9 175 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 SLC2A7Q6PXP3 512 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 DRAM2Q6UX65 266 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 C18orf65Q6ZTR6 163 aa3.18□□□□□ -1.9
SNHG1-220ENST00000544550 TMPRSS11FQ6ZWK6 438 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms