RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 LIPGQ9Y5X9 500 aa9.35□□□□□ -0.91
CLIP1-210ENST00000538120 OR6C6A6NF89 314 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF736B4DX44 427 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ABCD4O14678 606 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 NKX2-8O15522 239 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 OPN1MWP04001 364 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 GLAP06280 429 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ERCC1P07992 297 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 MELTFP08582 738 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 OPN1MW2P0DN77 364 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 OPN1MW3P0DN78 364 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 AGTR1P30556 359 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 RPL35P42766 123 aaKnown RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 OR3A4PP47883 348 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 PSG4Q00888 419 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 PPP1R1AQ13522 171 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 SNTB1Q13884 538 aaKnown RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF260Q3ZCT1 412 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 DMRTC1Q5HYR2 192 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 CBLN2Q8IUK8 224 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 SKA3Q8IX90 412 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 PRR18Q8N4B5 295 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ZFP62Q8NB50 900 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 OR1F12Q8NHA8 337 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 AQP3Q92482 292 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 FAM46BQ96A09 425 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 SLC25A21Q9BQT8 299 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 CST11Q9H112 138 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF552Q9H707 407 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ASF1BQ9NVP2 202 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 UPB1Q9UBR1 384 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ZNF175Q9Y473 711 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 CNTRLQ7Z7A1 2325 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 DHRS3O75911 302 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 ATG12O94817 140 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 CYB5AP00167 134 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 IGHV3-9P01782 118 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 PRF1P14222 555 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 WT1P19544 449 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 SSBP1Q04837 148 aaKnown RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 FGL1Q08830 312 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 COTL1Q14019 142 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 UBE2V2Q15819 145 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 PAN3Q58A45 887 aaKnown RBP9.34□□□□□ -0.91
CLIP1-210ENST00000538120 RNFT1Q5M7Z0 435 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 OR52W1Q6IF63 320 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 GLIPR1L1Q6UWM5 242 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 TMEM17Q86X19 198 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 LDLRAD3Q86YD5 345 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 TUSC5Q8IXB3 177 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 AKR7LQ8NHP1 331 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 HAS2Q92819 552 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 SPTSSAQ969W0 71 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 CYYR1Q96J86 154 aa9.34□□□□□ -0.91
CLIP1-210ENST00000538120 A0A0A6YYD4 124 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 PRR33A8MZF0 331 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 KLRC4-KLRK1H3BQV0 150 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 OR2F2O95006 317 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 MMP7P09237 267 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-210ENST00000538120 THBS4P35443 961 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 PCP4P48539 62 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 AKR1D1P51857 326 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 OR2F1Q13607 317 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 C3AR1Q16581 482 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 AWAT2Q6E213 333 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 DRAM2Q6UX65 266 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM104Q8NE00 496 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 FNDC9Q8TBE3 224 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 CASTOR1Q8WTX7 329 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 OR2H1Q9GZK4 316 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 ACKR4Q9NPB9 350 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 SLC7A10Q9NS82 523 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 COMMD9Q9P000 198 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 MRPS28Q9Y2Q9 187 aaKnown RBP9.33□□□□□ -0.92
CLIP1-210ENST00000538120 A0A087X0M5 115 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 A0A1B0GX30 115 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 OR14I1A6ND48 311 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 DISC1C4P0D8 188 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 EEF1E1-BLOC1S5C9J1V9 151 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 F5H0A9 414 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-210ENST00000538120 MRPL33O75394 65 aaKnown RBP9.33□□□□□ -0.92
CLIP1-210ENST00000538120 APOC1P02654 83 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 FAHP16930 419 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 ZBTB25P24278 435 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 CXADRP78310 365 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 FLI1Q01543 452 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-210ENST00000538120 SCRN3Q0VDG4 424 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 ECH1Q13011 328 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF345Q14585 488 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 CDNFQ49AH0 187 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 KCTD9Q7L273 389 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 ADAD2Q8NCV1 583 aaKnown RBP9.33□□□□□ -0.92
CLIP1-210ENST00000538120 OR56B2PQ8NGI1 322 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM68Q96MH6 324 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 TSNAXQ99598 290 aaKnown RBP9.33□□□□□ -0.92
CLIP1-210ENST00000538120 NICN1Q9BSH3 213 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 LINC00470Q9BZP3 86 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 LPAR5Q9H1C0 372 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms