RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 PPP1R2P41236 205 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 SYKP43405 635 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 SLC25A1P53007 311 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 SLC25A11Q02978 314 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 PDK2Q15119 407 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 GABRA6Q16445 453 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 ZNF239Q16600 458 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 HBMQ6B0K9 141 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 PTRHD1Q6GMV3 140 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 DGAT2L6Q6ZPD8 337 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 CENPQQ7L2Z9 268 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 PID1Q7Z2X4 250 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 GPR137CQ8N3F9 429 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 C17orf78Q8N4C9 275 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 CEP112Q8N8E3 955 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 WDR31Q8NA23 367 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 OR2V1Q8NHB1 315 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 RAB1CQ92928 201 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 VSIG2Q96IQ7 327 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 ARL5BQ96KC2 179 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 ALS2CR12Q96Q35 445 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 SLC38A2Q96QD8 506 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 PELOQ9BRX2 385 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 SLC35A5Q9BS91 424 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 PARD6BQ9BYG5 372 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 DSN1Q9H410 356 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 PTGES2Q9H7Z7 377 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 DCAF16Q9NXF7 216 aa3.2□□□□□ -1.9
ECHDC1-223ENST00000534442 IGHV1-18A0A0C4DH31 117 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 A0A1B0GWB2 263 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 BTNL10A8MVZ5 291 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 CLDN25C9JDP6 229 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 SULT2B1O00204 365 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 TNFSF11O14788 317 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 BCL2L11O43521 198 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 PRKYO43930 277 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 UGT2B17O75795 530 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 SCGNO76038 276 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 FGFR1OPO95684 399 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 CLPSP04118 112 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 GIG44P09565 113 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 DBTP11182 482 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 SYT1P21579 422 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 MDH2P40926 338 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 EVX1P49640 407 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 PRKXP51817 358 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 CARD18P57730 90 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 PRPS1P60891 318 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 CD47Q08722 323 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 PLCXD2Q0VAA5 305 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 ATAD3CQ5T2N8 411 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 PDZK1Q5T2W1 519 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 FBXW9Q5XUX1 488 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 PPP1R2P3Q6NXS1 205 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 LRRN1Q6UXK5 716 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 ZYG11AQ6WRX3 759 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 DHDDSQ86SQ9 333 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 ZNF100Q8IYN0 542 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 ST13P4Q8IZP2 240 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 UBE2J2Q8N2K1 259 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 OR2L13Q8N349 312 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 OR2M3Q8NG83 312 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 DOK4Q8TEW6 326 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 NELFBQ8WX92 580 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 CPNE4Q96A23 557 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 HAVCR1Q96D42 359 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 OLFM3Q96PB7 478 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 RBM14Q96PK6 669 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 IL4I1Q96RQ9 567 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 VAT1Q99536 393 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 RNF126Q9BV68 326 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 AICDAQ9GZX7 198 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 NAT10Q9H0A0 1025 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 ZNF385DQ9H6B1 395 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 LYRM4Q9HD34 91 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 POLE4Q9NR33 117 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 SLC7A10Q9NS82 523 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 ONECUT1Q9UBC0 465 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 Q9UF83 564 aa3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 WARS2Q9UGM6 360 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-223ENST00000534442 A0A0J9YW62 118 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 TCRBV4S1A1TA0A5B7 111 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 XKRY2A2RUG3 117 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 ISPDA4D126 451 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 CTAGE15A4D2H0 777 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 OR6C70A6NIJ9 312 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 SNTNA6NMZ2 147 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 TRIM49D1C9J1S8 452 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 KIF2AO00139 706 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 AP3B1O00203 1094 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 ACOX3O15254 700 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 ZNF264O43296 627 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 TIMM8AO60220 97 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 SERPINA3P01011 423 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 OXTP01178 125 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 HIST1H1TP22492 207 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 ME2P23368 584 aa3.18□□□□□ -1.9
ECHDC1-223ENST00000534442 RPL22P35268 128 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms