RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 TENM1Q9UKZ4 2725 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 FREM1Q5H8C1 2179 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 A0A096LNJ9 63 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 DEFB108AA8MXU0 73 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 C11orf94C9JXX5 98 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 MAGEB4O15481 346 aaPredicted RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 PSIP1O75475 530 aaKnown RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 VAPBO95292 243 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 ETHE1O95571 254 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 RPS2P15880 293 aaKnown RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 CNR1P21554 472 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 LOXP28300 417 aaPredicted RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 PAX5Q02548 391 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 C18orf21Q32NC0 220 aaPredicted RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 SLC25A35Q3KQZ1 300 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 PIGGQ5H8A4 983 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 ZNF691Q5VV52 312 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 ADNP2Q6IQ32 1131 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 TTC23LQ6PF05 361 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 BZW1Q7L1Q6 419 aaKnown RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 LUZP2Q86TE4 346 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 THOC6Q86W42 341 aaKnown RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 CDKL3Q8IVW4 592 aaPredicted RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 CA13Q8N1Q1 262 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 PRELID2Q8N945 189 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 OR10G9Q8NGN4 311 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 GIMAP1Q8WWP7 306 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 C10orf35Q96D05 121 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 WFIKKN1Q96NZ8 548 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 ALS2CR12Q96Q35 445 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 VCX2Q9H322 139 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 LRRC40Q9H9A6 602 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 PATZ1Q9HBE1 687 aaKnown RBP3.89□□□□□ -1.79
CASP4-213ENST00000534356 GLRX2Q9NS18 164 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 TREX1Q9NSU2 369 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 CALYQ9NYX4 217 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 CHMP5Q9NZZ3 219 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 SPATA7Q9P0W8 599 aa3.89□□□□□ -1.79
CASP4-213ENST00000534356 KCNE1BA0A087WTH5 132 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 TRGV5A0A0B4J1U4 118 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 C17orf51A8MQB3 221 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 EEF1E1-BLOC1S5C9J1V9 151 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 BCKDKO14874 412 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 EEF1E1O43324 174 aaKnown RBP3.88□□□□□ -1.79
CASP4-213ENST00000534356 PSTPIP1O43586 416 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 EPPINO95925 133 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 RPN2P04844 631 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 SMIM10L1P0DMW3 83 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 HPGDP15428 266 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 SLC1A1P43005 524 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 MAGEA1P43355 309 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 SSR4P51571 173 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 HERVK_113P61574 105 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 TBPL1P62380 186 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 BTN3A2P78410 334 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 GGTLC2Q14390 218 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 TMED2Q15363 201 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 RFX4Q33E94 735 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 LCN12Q6JVE5 192 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 UQCC3Q6UW78 93 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 ZFP2Q6ZN57 461 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 ABHD13Q7L211 337 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 ZNF550Q7Z398 422 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 LINC01551Q86U37 167 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 SLC13A5Q86YT5 568 aaPredicted RBP3.88□□□□□ -1.79
CASP4-213ENST00000534356 NUDCD3Q8IVD9 361 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 CPNE9Q8IYJ1 553 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 B3GNT7Q8NFL0 401 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 MCOLN3Q8TDD5 553 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 C1orf54Q8WWF1 131 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 PPWD1Q96BP3 646 aaKnown RBP3.88□□□□□ -1.79
CASP4-213ENST00000534356 STARD4Q96DR4 205 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 PIK3IP1Q96FE7 263 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 SLC41A3Q96GZ6 507 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 SMIM10Q96HG1 83 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 JSRP1Q96MG2 331 aaPredicted RBP3.88□□□□□ -1.79
CASP4-213ENST00000534356 TSNARE1Q96NA8 513 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 VCXQ9H320 206 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 CDC42EP4Q9H3Q1 356 aaKnown RBP3.88□□□□□ -1.79
CASP4-213ENST00000534356 RANBP3Q9H6Z4 567 aaPredicted RBP3.88□□□□□ -1.79
CASP4-213ENST00000534356 FBXO6Q9NRD1 293 aaPredicted RBP3.88□□□□□ -1.79
CASP4-213ENST00000534356 KLHL28Q9NXS3 571 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 CLEC4AQ9UMR7 237 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 YARS2Q9Y2Z4 477 aaKnown RBP3.88□□□□□ -1.79
CASP4-213ENST00000534356 EXPH5Q8NEV8 1989 aa3.88□□□□□ -1.79
CASP4-213ENST00000534356 IGLV4-69A0A075B6H9 119 aa3.87□□□□□ -1.79
CASP4-213ENST00000534356 TXNDC9O14530 226 aa3.87□□□□□ -1.79
CASP4-213ENST00000534356 SLC31A2O15432 143 aa3.87□□□□□ -1.79
CASP4-213ENST00000534356 SS18L1O75177 396 aaPredicted RBP3.87□□□□□ -1.79
CASP4-213ENST00000534356 CLDN9O95484 217 aa3.87□□□□□ -1.79
CASP4-213ENST00000534356 PTNP21246 168 aa3.87□□□□□ -1.79
CASP4-213ENST00000534356 RPS3P23396 243 aaKnown RBP eCLIP3.87□□□□□ -1.79
CASP4-213ENST00000534356 RPL22P35268 128 aaKnown RBP3.87□□□□□ -1.79
CASP4-213ENST00000534356 TAGLN2P37802 199 aaKnown RBP3.87□□□□□ -1.79
CASP4-213ENST00000534356 RPS15AP62244 130 aaKnown RBP3.87□□□□□ -1.79
CASP4-213ENST00000534356 RELAQ04206 551 aa3.87□□□□□ -1.79
CASP4-213ENST00000534356 CDH17Q12864 832 aa3.87□□□□□ -1.79
CASP4-213ENST00000534356 RSPO1Q2MKA7 263 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms