RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 FAM90A1Q86YD7 464 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 JAGN1Q8N5M9 183 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 POC1AQ8NBT0 407 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 Q8NFD4 153 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 OR6M1Q8NGM8 313 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 ISOC1Q96CN7 298 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 GPER1Q99527 375 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 GFI1Q99684 422 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 MRI1Q9BV20 369 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 NAA50Q9GZZ1 169 aaKnown RBP10.53□□□□□ -0.72
COPB1-208ENST00000532088 BATF3Q9NR55 127 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 C1orf123Q9NWV4 160 aa10.53□□□□□ -0.72
COPB1-208ENST00000532088 FBN2P35556 2912 aa10.52□□□□□ -0.72
COPB1-208ENST00000532088 IFITM5A6NNB3 132 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 CLDN25C9JDP6 229 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 TMEM178BH3BS89 294 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 AIPO00170 330 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 KDM4BO94953 1096 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 CDRT1O95170 752 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 RAB6AP20340 208 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 GIFP27352 417 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 PDLIM4P50479 330 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 SCAND1P57086 179 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 ERVK11-1P61568 191 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 VBP1P61758 197 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 NCS1P62166 190 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 DMRTC1Q5HYR2 192 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 ELP2Q6IA86 826 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 DNM1P46Q6ZS02 220 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 SLC25A26Q70HW3 274 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 ANGPTL5Q86XS5 388 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 GCSAMQ8N6F7 178 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 TBC1D15Q8TC07 691 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 LRRC29Q8WV35 223 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 TNFAIP8L1Q8WVP5 186 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 YIPF5Q969M3 257 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 C12orf43Q96C57 262 aaKnown RBP10.52□□□□□ -0.73
COPB1-208ENST00000532088 CEP19Q96LK0 163 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 FOXC2Q99958 501 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 NRIP2Q9BQI9 281 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 RNF167Q9H6Y7 350 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 CNTD2Q9H8S5 307 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 SEBOXQ9HB31 216 aaPredicted RBP10.52□□□□□ -0.73
COPB1-208ENST00000532088 HES4Q9HCC6 221 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 UFSP2Q9NUQ7 469 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
COPB1-208ENST00000532088 DCHS2Q6V1P9 2916 aa10.52□□□□□ -0.73
COPB1-208ENST00000532088 CACNA1DQ01668 2161 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 A0A0G2JK05 382 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 hCG_1807616A0A1W2PRN6 198 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 H3BMQ9 156 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 TRAPPC2LH3BP13 241 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 SYNGR1O43759 233 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 NDUFS7O75251 213 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 BPNT1O95861 308 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 TMEM225BP0DP42 221 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 CPT2P23786 658 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 COL8A2P25067 703 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 HTR2CP28335 458 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 POU3F4P49335 361 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 LSM3P62310 102 aaKnown RBP10.51□□□□□ -0.73
COPB1-208ENST00000532088 DYNC1I2Q13409 638 aaKnown RBP10.51□□□□□ -0.73
COPB1-208ENST00000532088 KCNJ8Q15842 424 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 SHEQ5VZ18 495 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 TEX36Q5VZQ5 186 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 SFXN4Q6P4A7 337 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 CLEC2AQ6UVW9 174 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 PEG10Q86TG7 708 aaKnown RBP10.51□□□□□ -0.73
COPB1-208ENST00000532088 OR51F2Q8NH61 342 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 CCL17Q92583 94 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 SLC25A46Q96AG3 418 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 MRPS24Q96EL2 167 aaKnown RBP10.51□□□□□ -0.73
COPB1-208ENST00000532088 PERPQ96FX8 193 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 TIMD4Q96H15 378 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 SPACA5Q96QH8 159 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 S100A13Q99584 98 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 FAM192AQ9GZU8 254 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 METTL9Q9H1A3 318 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 SMURF1Q9HCE7 757 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 MTCH1Q9NZJ7 389 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 FBLN5Q9UBX5 448 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 RSL24D1Q9UHA3 163 aaKnown RBP10.51□□□□□ -0.73
COPB1-208ENST00000532088 STEAP1Q9UHE8 339 aa10.51□□□□□ -0.73
COPB1-208ENST00000532088 MRPS28Q9Y2Q9 187 aaKnown RBP10.51□□□□□ -0.73
COPB1-208ENST00000532088 CHD3Q12873 2000 aaKnown RBP10.51□□□□□ -0.73
COPB1-208ENST00000532088 UNC79Q9P2D8 2635 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 DPPA5A6NC42 116 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 NDUFA2O43678 99 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 SSX4O60224 188 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 CDC14BO60729 498 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 RHBDL1O75783 438 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 MUC1P15941 1255 aaPredicted RBP10.5□□□□□ -0.73
COPB1-208ENST00000532088 RPS19P39019 145 aaKnown RBP10.5□□□□□ -0.73
COPB1-208ENST00000532088 OR3A4PP47883 348 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 SERPINB10P48595 397 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 RAB11BQ15907 218 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 DGUOKQ16854 277 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 SMIM21Q3B7S5 101 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 TMEM155Q4W5P6 130 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 NHLRC3Q5JS37 347 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms