RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 TREM2Q9NZC2 230 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 SPATA2Q9UM82 520 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 A3GALT2U3KPV4 340 aa13.37□□□□□ -0.27
TSPAN4-213ENST00000524895 IFNL4K9M1U5 179 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 OVOL3O00110 214 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 AKR7A2O43488 359 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 NXPH2O95156 264 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 MPIG6BO95866 241 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 SFTPBP07988 381 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 GTF2F2P13984 249 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 PMELP40967 661 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 NPBWR2P48146 333 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 GMFBP60983 142 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 HFEQ30201 348 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 OR10K2Q6IF99 312 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 BOLLQ8N9W6 283 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 OR5H6Q8NGV6 325 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 IGFBPL1Q8WX77 278 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 NRGNQ92686 78 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 EMG1Q92979 244 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 NRIP2Q9BQI9 281 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 TMEM59Q9BXS4 323 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 LIME1Q9H400 295 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 RHOFQ9HBH0 211 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 RBFOX1Q9NWB1 397 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 RNF7Q9UBF6 113 aa13.36□□□□□ -0.27
TSPAN4-213ENST00000524895 ARFGEF3Q5TH69 2177 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 FASNP49327 2511 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 A0A1W2PP11 408 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 TMEM14DPA8MWL7 114 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 LDLRAD4O15165 306 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 NOS1APO75052 506 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 CLPXO76031 633 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 CYB5R3P00387 301 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 ACAA1P09110 424 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 MGMTP16455 207 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 GLRA1P23415 457 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 CFHR2P36980 270 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 BMXP51813 675 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 QRFPP83859 136 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 UNC119Q13432 240 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 ZNF181Q2M3W8 571 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 UBE2NLQ5JXB2 153 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 FIP1L1Q6UN15 594 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 C1orf87Q8N0U7 546 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 FAM58AQ8N1B3 248 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 OSR2Q8N2R0 312 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 TMEM104Q8NE00 496 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 CCL17Q92583 94 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 BANF2Q9H503 90 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 TMEM106BQ9NUM4 274 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 FBLN5Q9UBX5 448 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 RAB22AQ9UL26 194 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 EDARQ9UNE0 448 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 NPTNQ9Y639 398 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 CACNG2Q9Y698 323 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 CRYBG3Q68DQ2 2970 aa13.35□□□□□ -0.27
TSPAN4-213ENST00000524895 SRRM5B3KS81 715 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 F8VVB4 439 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 F8VWA3 439 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 WNT9BO14905 357 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 HPGDSO60760 199 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 DAOP14920 347 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 PRKACAP17612 351 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 EGR1P18146 543 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 RAB6AP20340 208 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 S100A5P33763 92 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 EFNA4P52798 201 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 EFNB2P52799 333 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 ART1P52961 327 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 SNU13P55769 128 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 FGF12P61328 243 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 ERVK11-1P61568 191 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 MRPS11P82912 194 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 PLA2G7Q13093 441 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 SMIM21Q3B7S5 101 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 ELP2Q6IA86 826 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 CDH24Q86UP0 819 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 TGIF2LYQ8IUE0 185 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 GCSAMQ8N6F7 178 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 RDH5Q92781 318 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 PTX4Q96A99 478 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 MRPS24Q96EL2 167 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 GAL3ST1Q99999 423 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 URM1Q9BTM9 101 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 SELENOIQ9C0D9 397 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 HMG20AQ9NP66 347 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 DLL4Q9NR61 685 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 RHBDL2Q9NX52 303 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 RASL12Q9NYN1 266 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 ADAM30Q9UKF2 790 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 PEX16Q9Y5Y5 336 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 CACNA1DQ01668 2161 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 DSCAMO60469 2012 aa13.34□□□□□ -0.27
TSPAN4-213ENST00000524895 PTPN13Q12923 2485 aa13.33□□□□□ -0.28
TSPAN4-213ENST00000524895 CTDSP2O14595 271 aa13.33□□□□□ -0.28
TSPAN4-213ENST00000524895 LY6HO94772 140 aa13.33□□□□□ -0.28
TSPAN4-213ENST00000524895 F12P00748 615 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-213ENST00000524895 CD80P33681 288 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms