RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 TCF7L1Q9HCS4 588 aa12.14□□□□□ -0.47
SNF8-212ENST00000514089 ISYNA1Q9NPH2 558 aa12.14□□□□□ -0.47
SNF8-212ENST00000514089 TMEM138Q9NPI0 162 aa12.14□□□□□ -0.47
SNF8-212ENST00000514089 ACOT13Q9NPJ3 140 aa12.14□□□□□ -0.47
SNF8-212ENST00000514089 OR14J1Q9UGF5 321 aa12.14□□□□□ -0.47
SNF8-212ENST00000514089 IGKV1-27A0A075B6S5 117 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 TRBV5-5A0A0J9YX44 114 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 RFPL4AA6NLU0 287 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 RFPL4AL1F8VTS6 287 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 SPRY1O43609 319 aaPredicted RBP12.13□□□□□ -0.47
SNF8-212ENST00000514089 NOS1APO75052 506 aaPredicted RBP12.13□□□□□ -0.47
SNF8-212ENST00000514089 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
SNF8-212ENST00000514089 EMX1Q04741 257 aaPredicted RBP12.13□□□□□ -0.47
SNF8-212ENST00000514089 MLLT11Q13015 90 aaPredicted RBP12.13□□□□□ -0.47
SNF8-212ENST00000514089 TRAM1Q15629 374 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 TBCEQ15813 527 aaPredicted RBP12.13□□□□□ -0.47
SNF8-212ENST00000514089 ACP7Q6ZNF0 438 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 ST8SIA4Q92187 359 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 EMG1Q92979 244 aaKnown RBP12.13□□□□□ -0.47
SNF8-212ENST00000514089 SLITRK2Q9H156 845 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 SMURF1Q9HCE7 757 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 ING4Q9UNL4 249 aa12.13□□□□□ -0.47
SNF8-212ENST00000514089 LSM2Q9Y333 95 aaKnown RBP12.13□□□□□ -0.47
SNF8-212ENST00000514089 F5H0A9 414 aaPredicted RBP12.12□□□□□ -0.47
SNF8-212ENST00000514089 DVL1O14640 695 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 ANGPTL7O43827 346 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 MAS1P04201 325 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 ACAA1P09110 424 aaPredicted RBP12.12□□□□□ -0.47
SNF8-212ENST00000514089 NDUFB7P17568 137 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 GATA3P23771 443 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 MPZP25189 248 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 PSMA1P25786 263 aaKnown RBP12.12□□□□□ -0.47
SNF8-212ENST00000514089 ZFP36P26651 326 aaKnown RBP12.12□□□□□ -0.47
SNF8-212ENST00000514089 PSMB9P28065 219 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 PRDX2P32119 198 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 ZNF93P35789 620 aaPredicted RBP12.12□□□□□ -0.47
SNF8-212ENST00000514089 RPS11P62280 158 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNF8-212ENST00000514089 IL13RA1P78552 427 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 KRTAP1-1Q07627 177 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 TPBGQ13641 420 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 CR1LQ2VPA4 569 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 CHRFAM7AQ494W8 412 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 ARMCX4Q5H9R4 360 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 DDI2Q5TDH0 399 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 WDR25Q64LD2 544 aaPredicted RBP12.12□□□□□ -0.47
SNF8-212ENST00000514089 SPARTQ8N0X7 666 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 TEX29Q8N6K0 151 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 OR52N4Q8NGI2 321 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 TNFAIP8L1Q8WVP5 186 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 H1FXQ92522 213 aaKnown RBP12.12□□□□□ -0.47
SNF8-212ENST00000514089 FCGR1BQ92637 280 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 NRIP2Q9BQI9 281 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 MRI1Q9BV20 369 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 DNTTIP1Q9H147 329 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 C7orf69Q9H7B7 122 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 VCX3AQ9NNX9 186 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 NOX4Q9NPH5 578 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 MTCH1Q9NZJ7 389 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 LPAR3Q9UBY5 353 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 CDC42EP3Q9UKI2 254 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 VPS13CQ709C8 3753 aa12.12□□□□□ -0.47
SNF8-212ENST00000514089 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.11□□□□□ -0.47
SNF8-212ENST00000514089 KNG1P01042 644 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 ALDOBP05062 364 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 CALCBP10092 127 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 PSG2P11465 335 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 CPEP16870 476 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 PRKACAP17612 351 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 BCL3P20749 454 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 SNU13P55769 128 aaKnown RBP12.11□□□□□ -0.47
SNF8-212ENST00000514089 DOC2BQ14184 412 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 RSU1Q15404 277 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 HSD17B12Q53GQ0 312 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 FAM120AOSQ5T036 256 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 ATPAF1Q5TC12 328 aaPredicted RBP12.11□□□□□ -0.47
SNF8-212ENST00000514089 STUMQ69YW2 141 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 ZNF773Q6PK81 442 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 FAM58AQ8N1B3 248 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 JAGN1Q8N5M9 183 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 FAM216BQ8N7L0 139 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 ZSCAN4Q8NAM6 433 aaPredicted RBP12.11□□□□□ -0.47
SNF8-212ENST00000514089 TMEM185AQ8NFB2 350 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 ANGPTL6Q8NI99 470 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 ORAI1Q96D31 301 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 DERL3Q96Q80 235 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 PCDHB16Q9NRJ7 776 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 FOXJ3Q9UPW0 622 aa12.11□□□□□ -0.47
SNF8-212ENST00000514089 MEGF11A6BM72 1044 aa12.1□□□□□ -0.47
SNF8-212ENST00000514089 J3QLI3 93 aa12.1□□□□□ -0.47
SNF8-212ENST00000514089 GPR37O15354 613 aa12.1□□□□□ -0.47
SNF8-212ENST00000514089 TNFAIP8O95379 198 aa12.1□□□□□ -0.47
SNF8-212ENST00000514089 ECDO95905 644 aaPredicted RBP12.1□□□□□ -0.47
SNF8-212ENST00000514089 SCN1BQ07699 218 aa12.1□□□□□ -0.47
SNF8-212ENST00000514089 KCTD21Q4G0X4 260 aa12.1□□□□□ -0.47
SNF8-212ENST00000514089 SAXO1Q8IYX7 474 aa12.1□□□□□ -0.47
SNF8-212ENST00000514089 RAB40AQ8WXH6 277 aa12.1□□□□□ -0.47
SNF8-212ENST00000514089 NUDT16L1Q9BRJ7 211 aaKnown RBP12.1□□□□□ -0.47
SNF8-212ENST00000514089 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms