RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PPCDCQ96CD2 204 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 ZNF486Q96H40 463 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 SH2D2AQ9NP31 389 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 IDI2-AS1Q9NZ38 188 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 DOK5Q9P104 306 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 COL1A1P02452 1464 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 COL4A1P02462 1669 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 NRAPQ86VF7 1730 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 EI24O14681 340 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 OIP5O43482 229 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 EDN1P05305 212 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 RAB35Q15286 201 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 NEDD8Q15843 81 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 DCUN1D2Q6PH85 259 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 ADAMTSL5Q6ZMM2 481 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 C4orf33Q8N1A6 199 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 ZNF614Q8N883 585 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 ZNF383Q8NA42 475 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 OR2T12Q8NG77 320 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 OR52E4Q8NGH9 312 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 C8orf46Q8TAG6 207 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 HSFY1Q96LI6 401 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 MARVELD1Q9BSK0 173 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 SLC25A39Q9BZJ4 359 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 ING4Q9UNL4 249 aa6.33□□□□□ -1.4
PDGFRA-206ENST00000508170 SCN7AQ01118 1682 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 TRBV5-5A0A0J9YX44 114 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 HMX2A2RU54 273 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 ARL5CA6NH57 179 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 F5H5K5 113 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 NDUFS7O75251 213 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 NXPH3O95157 252 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 TSPAN19P0C672 248 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 GP1BBP13224 206 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 PVRP15151 417 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 PAX1P15863 534 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 ITGB7P26010 798 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 DDTP30046 118 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 EVX1P49640 407 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 GZMMP51124 257 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 SSR4P51571 173 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 DLX1P56177 255 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 ARL16Q0P5N6 197 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 FOXF2Q12947 444 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 OTUD1Q5VV17 481 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 WDR82Q6UXN9 313 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 RPLP0P6Q8NHW5 317 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 SPATA3Q8NHX4 192 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 OLIG1Q8TAK6 271 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 RCN3Q96D15 328 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 ADGRG7Q96K78 797 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 DNAJC30Q96LL9 226 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 MLST8Q9BVC4 326 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 EXOSC4Q9NPD3 245 aaKnown RBP6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 AURKAIP1Q9NWT8 199 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 CALML5Q9NZT1 146 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 GALPQ9UBC7 116 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 DNAJC12Q9UKB3 198 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 CARHSP1Q9Y2V2 147 aaKnown RBP6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 TAF1P21675 1872 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 MYH13Q9UKX3 1938 aa6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 COL5A3P25940 1745 aaPredicted RBP6.32□□□□□ -1.4
PDGFRA-206ENST00000508170 GYG2O15488 501 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 TBX6O95947 436 aaPredicted RBP6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 KLK7P49862 253 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 MFAP5Q13361 173 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 IZUMO4Q1ZYL8 232 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 TOMM20LQ6UXN7 152 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 UBAC2Q8NBM4 344 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 SFT2D1Q8WV19 159 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 RDH5Q92781 318 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 EEF1AKMT3Q96AZ1 226 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 GALMQ96C23 342 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 PDCD10Q9BUL8 212 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 VSIRQ9H7M9 311 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 REEP1Q9H902 201 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 PELI2Q9HAT8 420 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 RAI2Q9Y5P3 530 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 A0A0A6YYD4 124 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 C15orf61A6NNL5 157 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 RHODO00212 210 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 FAAHO00519 579 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 WNT9BO14905 357 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 TIMM23O14925 209 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 MRPS12O15235 138 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 GGCTO75223 188 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 C1QBP02746 253 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 OR1D4P47884 311 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 PTH2RP49190 550 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 SNRPNP63162 240 aaKnown RBP6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 CNPY1Q3B7I2 92 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 OR10K2Q6IF99 312 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 OSR2Q8N2R0 312 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 OR4K17Q8NGC6 315 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 TM4SF18Q96CE8 201 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 DDIT4LQ96D03 193 aa6.31□□□□□ -1.4
PDGFRA-206ENST00000508170 PIK3IP1Q96FE7 263 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms