RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 RSL24D1Q9UHA3 163 aaKnown RBP10.27□□□□□ -0.77
UPF3A-210ENST00000493727 SLC7A11Q9UPY5 501 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 IGLV3-9A0A075B6K5 115 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 PDCD5O14737 125 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 SLC22A1O15245 554 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 PIN1P1O15428 100 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 SULT1B1O43704 296 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 GMDSO60547 372 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 CDRT1O95170 752 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 CST4P01036 141 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 MAS1P04201 325 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 ATF1P18846 271 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 SRMP19623 302 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 GIFP27352 417 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 BDKRB2P30411 391 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 ALDH3B1P43353 468 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 OR8G1Q15617 311 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 UTS2BQ765I0 119 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 OR1M1Q8NGA1 313 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 OR13G1Q8NGZ3 307 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 TRMT10AQ8TBZ6 339 aaKnown RBP10.26□□□□□ -0.77
UPF3A-210ENST00000493727 DVL3Q92997 716 aaPredicted RBP10.26□□□□□ -0.77
UPF3A-210ENST00000493727 MSI2Q96DH6 328 aaKnown RBP10.26□□□□□ -0.77
UPF3A-210ENST00000493727 TECTBQ96PL2 329 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 MICU1Q9BPX6 476 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 BPESC1Q9GZL8 116 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 FAM192AQ9GZU8 254 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 CHODLQ9H9P2 273 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 MSL2Q9HCI7 577 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 SNTG1Q9NSN8 517 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 NKIRAS2Q9NYR9 191 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 FOXJ3Q9UPW0 622 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 MPC1Q9Y5U8 109 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 DYSFO75923 2080 aa10.26□□□□□ -0.77
UPF3A-210ENST00000493727 TRAV8-7A0A075B6U6 113 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 TRAV1-2A0A0B4J238 106 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 IGHV4-61A0A0C4DH41 118 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 FAM230AA0A1W2PPH8 454 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 H3BMQ9 156 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 M0R233 179 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 DAOP14920 347 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 PRKACBP22694 351 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 TNFSF4P23510 183 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 AZGP1P25311 298 aaKnown RBP10.25□□□□□ -0.77
UPF3A-210ENST00000493727 TGFBR1P36897 503 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 MTNR1BP49286 362 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 ZNF81P51508 661 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 MXD1Q05195 221 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 MZT1Q08AG7 82 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 CTF1Q16619 201 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 TMEM255AQ5JRV8 349 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 FAM120AOSQ5T036 256 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 DDI2Q5TDH0 399 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 USP43Q70EL4 1123 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 JAGN1Q8N5M9 183 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 OR10AD1Q8NGE0 317 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 OR51A2Q8NGJ7 313 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 C12orf43Q96C57 262 aaKnown RBP10.25□□□□□ -0.77
UPF3A-210ENST00000493727 BORCS8Q96FH0 119 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 CPNE2Q96FN4 548 aaPredicted RBP10.25□□□□□ -0.77
UPF3A-210ENST00000493727 SLC30A2Q9BRI3 323 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 RTL8AQ9BWD3 113 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 RBM38Q9H0Z9 239 aaKnown RBP10.25□□□□□ -0.77
UPF3A-210ENST00000493727 PPIL3Q9H2H8 161 aaKnown RBP10.25□□□□□ -0.77
UPF3A-210ENST00000493727 TMEM138Q9NPI0 162 aa10.25□□□□□ -0.77
UPF3A-210ENST00000493727 SMIM30A4D0T7 59 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 ZSCAN5BA6NJL1 495 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 SPRY3O43610 288 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 TGFAP01135 160 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 IGFBP3P17936 291 aaPredicted RBP10.24□□□□□ -0.77
UPF3A-210ENST00000493727 RAB3BP20337 219 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 SDC2P34741 201 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 GPM6AP51674 278 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 UBE2V2Q15819 145 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 DMRTC1Q5HYR2 192 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 GLT8D1Q68CQ7 371 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 TMEM42Q69YG0 159 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 LHFPL2Q6ZUX7 228 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 NKAIN3Q8N8D7 197 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 SPERTQ8NA61 448 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 OR2Z1Q8NG97 314 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 NDNFQ8TB73 568 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 GTF3AQ92664 365 aaKnown RBP10.24□□□□□ -0.77
UPF3A-210ENST00000493727 SPSB1Q96BD6 273 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 DGCR14Q96DF8 476 aaKnown RBP10.24□□□□□ -0.77
UPF3A-210ENST00000493727 ELMOD3Q96FG2 381 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 GPER1Q99527 375 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 DCSTAMPQ9H295 470 aa10.24□□□□□ -0.77
UPF3A-210ENST00000493727 AK6Q9Y3D8 172 aaKnown RBP10.24□□□□□ -0.77
UPF3A-210ENST00000493727 OR5B21A6NL26 309 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 ZNF732B4DXR9 585 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 H0YL77 283 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 ZNF701M0R085 212 aaPredicted RBP10.23□□□□□ -0.77
UPF3A-210ENST00000493727 TPD52L2O43399 206 aaKnown RBP10.23□□□□□ -0.77
UPF3A-210ENST00000493727 PSMD7P51665 324 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 FUT6P51993 359 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 ATP1B3P54709 279 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 SPCS2Q15005 226 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 CEACAM21Q3KPI0 293 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 ASPHD2Q6ICH7 369 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms