RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 EDAQ92838 391 aa12.12□□□□□ -0.47
TFE3-204ENST00000493583 THOC3Q96J01 351 aaKnown RBP12.12□□□□□ -0.47
TFE3-204ENST00000493583 SERINC1Q9NRX5 453 aa12.12□□□□□ -0.47
TFE3-204ENST00000493583 TREM2Q9NZC2 230 aa12.12□□□□□ -0.47
TFE3-204ENST00000493583 MUC22E2RYF6 1773 aaPredicted RBP12.11□□□□□ -0.47
TFE3-204ENST00000493583 LAMA5O15230 3695 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 SLC31A2O15432 143 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 SRSF10O75494 262 aaKnown RBP12.11□□□□□ -0.47
TFE3-204ENST00000493583 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 MYBPHQ13203 477 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 PCK2Q16822 640 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 HIST2H3AQ71DI3 136 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 H1FNTQ75WM6 255 aaPredicted RBP12.11□□□□□ -0.47
TFE3-204ENST00000493583 SKA3Q8IX90 412 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 HOXB13Q92826 284 aaPredicted RBP12.11□□□□□ -0.47
TFE3-204ENST00000493583 MISP3Q96FF7 219 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 CRLF2Q9HC73 371 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 SLC17A5Q9NRA2 495 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 TMEM100Q9NV29 134 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 EML6Q6ZMW3 1958 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 CFAP47Q6ZTR5 3102 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 FAM24AA6NFZ4 105 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 AP4M1O00189 453 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 CAPZBP47756 277 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 GRINAQ7Z429 371 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 NMES1Q9C002 83 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 WIF1Q9Y5W5 379 aa12.11□□□□□ -0.47
TFE3-204ENST00000493583 RIF1Q5UIP0 2472 aaKnown RBP12.11□□□□□ -0.47
TFE3-204ENST00000493583 RAB5AP20339 215 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 RNF4P78317 190 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 SLC43A2Q8N370 569 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 RNF133Q8WVZ7 376 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 KCNJ16Q9NPI9 418 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 B3GALT5Q9Y2C3 310 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 PHOX2AO14813 284 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 CFIP05156 583 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
TFE3-204ENST00000493583 EDN3P14138 238 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 DUSP1P28562 367 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 UBE2V2Q15819 145 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 TMEM123Q8N131 208 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 PRRX2Q99811 253 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 C8orf33Q9H7E9 229 aaPredicted RBP12.1□□□□□ -0.47
TFE3-204ENST00000493583 FBRSQ9HAH7 460 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 TMEM14DPA8MWL7 114 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 CYTIPO60759 359 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 MBPP02686 304 aaPredicted RBP12.1□□□□□ -0.47
TFE3-204ENST00000493583 CELA2AP08217 269 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 RAB5CP51148 216 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 ABCA11PQ4W5N1 156 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 SPIN3Q5JUX0 258 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 C9orf135Q5VTT2 229 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 TDHQ8IZJ6 230 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 ARRDC1Q8N5I2 433 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 OR10G3Q8NGC4 313 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 FGF21Q9NSA1 209 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 PIGLQ9Y2B2 252 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
TFE3-204ENST00000493583 ALG1L2C9J202 215 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 HMGB3O15347 200 aaKnown RBP12.09□□□□□ -0.47
TFE3-204ENST00000493583 MBP02144 154 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 IGKV3-11P04433 115 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 CLDN17P56750 224 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 GABREP78334 506 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 CYCSP99999 105 aaKnown RBP12.09□□□□□ -0.47
TFE3-204ENST00000493583 PIGYQ3MUY2 71 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 RPUSD3Q6P087 351 aaKnown RBP12.09□□□□□ -0.47
TFE3-204ENST00000493583 SLC38A9Q8NBW4 561 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 TCTN2Q96GX1 697 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 CNTNAP3Q9BZ76 1288 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 PPP4R1LQ9P1A2 415 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 FRG2CA6NGY1 282 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 OR2C1O95371 312 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 BPNT1O95861 308 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 RPS16P62249 146 aaKnown RBP12.09□□□□□ -0.47
TFE3-204ENST00000493583 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 SPNS3Q6ZMD2 512 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 PEG10Q86TG7 708 aaKnown RBP12.09□□□□□ -0.47
TFE3-204ENST00000493583 NKAIN3Q8N8D7 197 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 C1orf147Q96MC9 270 aaPredicted RBP12.09□□□□□ -0.47
TFE3-204ENST00000493583 ZNF160Q9HCG1 818 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 ROS1P08922 2347 aa12.09□□□□□ -0.47
TFE3-204ENST00000493583 TSTD3H0UI37 97 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 TIAF1O95411 115 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 CD37P11049 281 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 EPHA1P21709 976 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 FBLP22087 321 aaKnown RBP12.08□□□□□ -0.47
TFE3-204ENST00000493583 DVL1P1P54792 670 aaPredicted RBP12.08□□□□□ -0.47
TFE3-204ENST00000493583 FDX2Q6P4F2 183 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 KCNG3Q8TAE7 436 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 SMIM8Q96KF7 97 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 TMEM68Q96MH6 324 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 LIPGQ9Y5X9 500 aa12.08□□□□□ -0.47
TFE3-204ENST00000493583 PHF1O43189 567 aaPredicted RBP12.08□□□□□ -0.48
TFE3-204ENST00000493583 TSPAN2O60636 221 aa12.08□□□□□ -0.48
TFE3-204ENST00000493583 SLC34A2O95436 690 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms