RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 TMIGD2Q96BF3 282 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 SDSLQ96GA7 329 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 MRPL48Q96GC5 212 aaKnown RBP5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 TMEM80Q96HE8 168 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 MED30Q96HR3 178 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 DCTN5Q9BTE1 182 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 MRI1Q9BV20 369 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 OCEL1Q9H607 264 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 PLEKHA1Q9HB21 404 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 ESM1Q9NQ30 184 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 PLCXD1Q9NUJ7 323 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 FKBP14Q9NWM8 211 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 DNAJB11Q9UBS4 358 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 NUP50Q9UKX7 468 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 HHLA2Q9UM44 414 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 SLC7A11Q9UPY5 501 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 CMYA5Q8N3K9 4069 aa5.93□□□□□ -1.46
PDLIM1-204ENST00000492511 A0A0A6YYJ9 748 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 IGKV1-12A0A0C4DH73 117 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 TRBV2A0A0J9YWF9 115 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 CENPVL3A0A0U1RRI6 287 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 TMEM212A6NML5 194 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 H0YJX3 145 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 GPR37O15354 613 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 NDUFB3O43676 98 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 GATBO75879 557 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 INMTO95050 263 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 ALX3O95076 343 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 SERPINA3P01011 423 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 IGKV1D-12P01611 117 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 MT-ND2P03891 347 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 LIPFP07098 398 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 PIPP12273 146 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 AZGP1P25311 298 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 C21orf33P30042 268 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 PRDX2P32119 198 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 NPBWR2P48146 333 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 RBP2P50120 134 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 DLX1P56177 255 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 MTCP1P56278 107 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 CAV3P56539 151 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 HILS1P60008 231 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 IL13RA1P78552 427 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 MRPL28Q13084 256 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 CDK5R1Q15078 307 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 CCDC58Q4VC31 144 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 ARMCX4Q5H9R4 360 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 ZNF529Q6P280 563 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 RPL22L1Q6P5R6 122 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 C9orf139Q6ZV77 190 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 PARP16Q8N5Y8 322 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 Q8N7P7 452 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 SIGLECL1Q8N7X8 197 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 PNLDC1Q8NA58 520 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 BPIFB6Q8NFQ5 453 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 OR13C3Q8NGS6 347 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 OR52N1Q8NH53 320 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 OR5AK2Q8NH90 309 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 SGCDQ92629 289 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 SLAMF9Q96A28 289 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 BORCS8Q96FH0 119 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 C1orf147Q96MC9 270 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 WDFY2Q96P53 400 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 SPACA5Q96QH8 159 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 MYCBPQ99417 103 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 CNTD2Q9H8S5 307 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 ELL3Q9HB65 397 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 BABAM2Q9NXR7 383 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 CNOT2Q9NZN8 540 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 IL36RNQ9UBH0 155 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 SLC25A10Q9UBX3 287 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 POLDIP2Q9Y2S7 368 aa5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 EXOSC1Q9Y3B2 195 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-204ENST00000492511 TRAV40A0A0B4J280 105 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 MDFIC2A0A1B0GVS7 189 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 IRGMA1A4Y4 181 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 EFCAB10A6NFE3 127 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 NKX6-3A6NJ46 265 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 SPRY1O43609 319 aaPredicted RBP5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 TOX4O94842 621 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 NXPH2O95156 264 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 KNG1P01042 644 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 CCDC159P0C7I6 412 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 CALCBP10092 127 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 ZNF20P17024 532 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 BCL3P20749 454 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 PRKACBP22694 351 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 FPR2P25090 351 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 ATP1B3P54709 279 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 ZP1P60852 638 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 RPS11P62280 158 aaKnown RBP eCLIP5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 PRB3Q04118 309 aaPredicted RBP5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 PDZK1IP1Q13113 114 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 CNN3Q15417 329 aaKnown RBP5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 LRRC10Q5BKY1 277 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 C6orf141Q5SZD1 244 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 RUSC1-AS1Q66K80 236 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 DMKNQ6E0U4 476 aaPredicted RBP5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 BRD3OSQ6XYD6 125 aa5.91□□□□□ -1.46
PDLIM1-204ENST00000492511 TMPRSS11AQ6ZMR5 421 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms