RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 PURGQ9UJV8 347 aaKnown RBP14.37□□□□□ -0.11
VIM-205ENST00000485947 SLC7A11Q9UPY5 501 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 RHBDD3Q9Y3P4 386 aa14.37□□□□□ -0.11
VIM-205ENST00000485947 CLDN25C9JDP6 229 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 TPD52L2O43399 206 aaKnown RBP14.36□□□□□ -0.11
VIM-205ENST00000485947 IGHV1-46P01743 117 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 TNFSF4P23510 183 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 HTR2CP28335 458 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 ZNF93P35789 620 aaPredicted RBP14.36□□□□□ -0.11
VIM-205ENST00000485947 MPV17P39210 176 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 FUT6P51993 359 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 PRSS12P56730 875 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 PSG7Q13046 419 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 PRDX4Q13162 271 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 RAB11BQ15907 218 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 ALKBH6Q3KRA9 238 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 HES5Q5TA89 166 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 PLCXD3Q63HM9 321 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 MOB3CQ70IA8 216 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 ZDHHC23Q8IYP9 409 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 JAGN1Q8N5M9 183 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 PNLDC1Q8NA58 520 aaKnown RBP14.36□□□□□ -0.11
VIM-205ENST00000485947 OR52N4Q8NGI2 321 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 CLDND2Q8NHS1 167 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 TMEM158Q8WZ71 300 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 RAB1CQ92928 201 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 RAB39BQ96DA2 213 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 BORCS8Q96FH0 119 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 CMTM3Q96MX0 182 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 WDFY2Q96P53 400 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 SLC22A4Q9H015 551 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 ADAM30Q9UKF2 790 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 SPATA2Q9UM82 520 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 NOP16Q9Y3C1 178 aaKnown RBP14.36□□□□□ -0.11
VIM-205ENST00000485947 MALRD1Q5VYJ5 2156 aa14.36□□□□□ -0.11
VIM-205ENST00000485947 ZNF850A8MQ14 1090 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 TIMM8AO60220 97 aaPredicted RBP14.35□□□□□ -0.11
VIM-205ENST00000485947 SLC2A2P11168 524 aaPredicted RBP14.35□□□□□ -0.11
VIM-205ENST00000485947 TNFRSF1AP19438 455 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 BMXP51813 675 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 CR1LQ2VPA4 569 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 CEACAM21Q3KPI0 293 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 GLCCI1Q86VQ1 547 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 OR8G5Q8NG78 346 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 ZNF671Q8TAW3 534 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 TRMT10AQ8TBZ6 339 aaKnown RBP14.35□□□□□ -0.11
VIM-205ENST00000485947 HIST1H2AAQ96QV6 131 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 ETV7Q9Y603 341 aa14.35□□□□□ -0.11
VIM-205ENST00000485947 RGS5O15539 181 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 MSMBP08118 114 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 IL2RGP31785 369 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 RBP2P50120 134 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 ATP1B3P54709 279 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 LMO4P61968 165 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 SCGB2A2Q13296 93 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 KISS1Q15726 138 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 PEG10Q86TG7 708 aaKnown RBP14.34□□□□□ -0.11
VIM-205ENST00000485947 BHLHE23Q8NDY6 225 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 OR5A2Q8NGI9 324 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 OR51F2Q8NH61 342 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 S100ZQ8WXG8 99 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 GPER1Q99527 375 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 LIN7BQ9HAP6 207 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 COMMD3Q9UBI1 195 aa14.34□□□□□ -0.11
VIM-205ENST00000485947 TRAV20A0A0B4J274 112 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 ZSCAN5BA6NJL1 495 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 OR5B21A6NL26 309 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 IFNL4K9M1U5 179 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 CTDSP2O14595 271 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 SPRY3O43610 288 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 CDC14BO60729 498 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 UBBP0CG47 229 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 SNRPBP14678 240 aaKnown RBP14.33□□□□□ -0.12
VIM-205ENST00000485947 NPRL2Q8WTW4 380 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 SLC25A28Q96A46 364 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 TMEM186Q96B77 213 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 CEP19Q96LK0 163 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 CNTD2Q9H8S5 307 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 GHRLQ9UBU3 117 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 IL19Q9UHD0 177 aa14.33□□□□□ -0.12
VIM-205ENST00000485947 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.32□□□□□ -0.12
VIM-205ENST00000485947 A0A1B0GWJ7 208 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 FAM230AA0A1W2PPH8 454 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 BPNT1O95861 308 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 PAHP00439 452 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 CPT2P23786 658 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 TNFAIP6P98066 277 aaPredicted RBP14.32□□□□□ -0.12
VIM-205ENST00000485947 LRRC28Q86X40 367 aaPredicted RBP14.32□□□□□ -0.12
VIM-205ENST00000485947 SPERTQ8NA61 448 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 LGALS14Q8TCE9 139 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 HPSE2Q8WWQ2 592 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 OR5P3Q8WZ94 311 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 FAM3DQ96BQ1 224 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 ITPKCQ96DU7 683 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 MICU1Q9BPX6 476 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 ADAT1Q9BUB4 502 aaKnown RBP14.32□□□□□ -0.12
VIM-205ENST00000485947 RTL8AQ9BWD3 113 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 TMEM100Q9NV29 134 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 OR5V1Q9UGF6 321 aa14.32□□□□□ -0.12
VIM-205ENST00000485947 MRPS28Q9Y2Q9 187 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms