RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PBOV1Q9GZY1 135 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 RGCCQ9H4X1 137 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 GPR84Q9NQS5 396 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 FAM206AQ9NX38 181 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 FRRS1LQ9P0K9 344 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 CLN8Q9UBY8 286 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 OR52A1Q9UKL2 312 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 AUP1Q9Y679 476 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 TRAV38-1A0A0B4J264 116 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 PPIAL4CA0A0B4J2A2 164 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 OOEPA6NGQ2 149 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 A6NIN4 97 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 ANXA2P2A6NMY6 339 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 OR4C45A6NMZ5 311 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF879B4DU55 563 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 H3BSH0 61 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 ADAM20O43506 726 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 SC5DO75845 299 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 ZFPL1O95159 310 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 LHBP01229 141 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 UBCP0CG48 685 aaKnown RBP6.89□□□□□ -1.31
HDAC6-221ENST00000477561 MAP2K3P46734 347 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 MTNR1BP49286 362 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 RORCP51449 518 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 NANOS3P60323 173 aaKnown RBP6.89□□□□□ -1.31
HDAC6-221ENST00000477561 PAX2Q02962 417 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 PAX8Q06710 450 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 ODF4Q2M2E3 257 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 Q499Y3 187 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 HSD17B12Q53GQ0 312 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 KLF17Q5JT82 389 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-221ENST00000477561 WDR38Q5JTN6 314 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 CEP78Q5JTW2 689 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 TMEM244Q5VVB8 128 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 WDR25Q64LD2 544 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-221ENST00000477561 WDR82Q6UXN9 313 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF841Q6ZN19 808 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 TMEM91Q6ZNR0 172 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 LINC00299Q6ZSB3 139 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 MOB3CQ70IA8 216 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 TPRA1Q86W33 373 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 FAM90A1Q86YD7 464 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 CROCCP3Q8IVE0 287 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 ZDHHC23Q8IYP9 409 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 BCL6BQ8N143 479 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-221ENST00000477561 PRSS35Q8N3Z0 413 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 FTMTQ8N4E7 242 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 TEX29Q8N6K0 151 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 OR5T2Q8NGG2 359 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 GPR148Q8TDV2 347 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF418Q8TF45 676 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-221ENST00000477561 RAB40AQ8WXH6 277 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 OR5P3Q8WZ94 311 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 AP3S1Q92572 193 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 RNF170Q96K19 258 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 TECTBQ96PL2 329 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 HIST1H2AAQ96QV6 131 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 SLC6A7Q99884 636 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 PDCD1LG2Q9BQ51 273 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 NUDT16L1Q9BRJ7 211 aaKnown RBP6.89□□□□□ -1.31
HDAC6-221ENST00000477561 MRI1Q9BV20 369 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 SLITRK2Q9H156 845 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 CTSZQ9UBR2 303 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 POLR3KQ9Y2Y1 108 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-221ENST00000477561 MPC1Q9Y5U8 109 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 A3GALT2U3KPV4 340 aa6.89□□□□□ -1.31
HDAC6-221ENST00000477561 TRAV1-2A0A0B4J238 106 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 IGHV2-70DA0A0C4DH43 119 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 TRBV5-5A0A0J9YX44 114 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 A0A0U1RQV5 110 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 A0A1B0GW55 424 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF732B4DXR9 585 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 C22orf46C9J442 243 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 P2RY10O00398 339 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 PDCD5O14737 125 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 TNFRSF13BO14836 293 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-221ENST00000477561 SRSF10O75494 262 aaKnown RBP6.88□□□□□ -1.31
HDAC6-221ENST00000477561 CLPXO76031 633 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 CDRT1O95170 752 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 FSTL3O95633 263 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 CST4P01036 141 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 FSHBP01225 129 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 TTRP02766 147 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 TFF1P04155 84 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 ISG15P05161 165 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 UCHL1P09936 223 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 OCM2P0CE71 109 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DUX4L2P0CJ85 424 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DUX4L3P0CJ86 424 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DUX4L4P0CJ87 422 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DUX4L5P0CJ88 424 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DUX4L6P0CJ89 424 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DUX4L7P0CJ90 424 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 FAHP16930 419 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 CALRP27797 417 aaKnown RBP6.88□□□□□ -1.31
HDAC6-221ENST00000477561 TGFBR1P36897 503 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 KIR3DL2P43630 455 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 GPM6AP51674 278 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 RIPPLY1Q0D2K3 151 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 SCGB2A2Q13296 93 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms