RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ZNHIT1O43257 154 aa8.81□□□□□ -1
NUP50-214ENST00000469163 GSTZ1O43708 216 aaPredicted RBP8.81□□□□□ -1
NUP50-214ENST00000469163 TBX19O60806 448 aa8.81□□□□□ -1
NUP50-214ENST00000469163 HLA-DQA2P01906 255 aa8.81□□□□□ -1
NUP50-214ENST00000469163 ACP2P11117 423 aa8.81□□□□□ -1
NUP50-214ENST00000469163 SELENOWP63302 87 aa8.81□□□□□ -1
NUP50-214ENST00000469163 RAB40BQ12829 278 aa8.81□□□□□ -1
NUP50-214ENST00000469163 CBFBQ13951 182 aa8.81□□□□□ -1
NUP50-214ENST00000469163 DRAM2Q6UX65 266 aa8.81□□□□□ -1
NUP50-214ENST00000469163 TOMM20LQ6UXN7 152 aa8.81□□□□□ -1
NUP50-214ENST00000469163 LHFPL2Q6ZUX7 228 aa8.81□□□□□ -1
NUP50-214ENST00000469163 TSEN54Q7Z6J9 526 aaKnown RBP8.81□□□□□ -1
NUP50-214ENST00000469163 KIR2DL5AQ8N109 375 aa8.81□□□□□ -1
NUP50-214ENST00000469163 OR1J2Q8NGS2 313 aa8.81□□□□□ -1
NUP50-214ENST00000469163 OR2V1Q8NHB1 315 aa8.81□□□□□ -1
NUP50-214ENST00000469163 DIO2Q92813 273 aa8.81□□□□□ -1
NUP50-214ENST00000469163 PCGF1Q9BSM1 259 aa8.81□□□□□ -1
NUP50-214ENST00000469163 AK6Q9Y3D8 172 aaKnown RBP8.81□□□□□ -1
NUP50-214ENST00000469163 A0A0A6YYD5 115 aa8.8□□□□□ -1
NUP50-214ENST00000469163 MEIS3P1A6NDR6 274 aa8.8□□□□□ -1
NUP50-214ENST00000469163 A8MVM7 634 aa8.8□□□□□ -1
NUP50-214ENST00000469163 IFNL4K9M1U5 179 aa8.8□□□□□ -1
NUP50-214ENST00000469163 HKR1P10072 659 aa8.8□□□□□ -1
NUP50-214ENST00000469163 CHATP28329 748 aa8.8□□□□□ -1
NUP50-214ENST00000469163 FHITP49789 147 aa8.8□□□□□ -1
NUP50-214ENST00000469163 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
NUP50-214ENST00000469163 MRPL52Q86TS9 123 aaKnown RBP8.8□□□□□ -1
NUP50-214ENST00000469163 TMEM104Q8NE00 496 aa8.8□□□□□ -1
NUP50-214ENST00000469163 OR13D1Q8NGV5 346 aa8.8□□□□□ -1
NUP50-214ENST00000469163 CPT1CQ8TCG5 803 aa8.8□□□□□ -1
NUP50-214ENST00000469163 ZNF587Q96SQ5 575 aaPredicted RBP8.8□□□□□ -1
NUP50-214ENST00000469163 DEFB126Q9BYW3 111 aa8.8□□□□□ -1
NUP50-214ENST00000469163 SEMA4GQ9NTN9 838 aa8.8□□□□□ -1
NUP50-214ENST00000469163 ASB6Q9NWX5 421 aa8.8□□□□□ -1
NUP50-214ENST00000469163 NAGKQ9UJ70 344 aa8.8□□□□□ -1
NUP50-214ENST00000469163 ABCA4P78363 2273 aa8.8□□□□□ -1
NUP50-214ENST00000469163 PKDREJQ9NTG1 2253 aa8.8□□□□□ -1
NUP50-214ENST00000469163 TRAV34A0A0B4J273 112 aa8.8□□□□□ -1
NUP50-214ENST00000469163 TRBV4-1A0A0J9YWV2 114 aa8.8□□□□□ -1
NUP50-214ENST00000469163 IGHV5-10-1A0A0J9YXX1 117 aa8.8□□□□□ -1
NUP50-214ENST00000469163 RBMXL2O75526 392 aaKnown RBP8.8□□□□□ -1
NUP50-214ENST00000469163 ONECUT2O95948 504 aa8.8□□□□□ -1
NUP50-214ENST00000469163 MRPL3P09001 348 aaKnown RBP8.8□□□□□ -1
NUP50-214ENST00000469163 CEACAM3P40198 252 aa8.8□□□□□ -1
NUP50-214ENST00000469163 GRK6P43250 576 aa8.8□□□□□ -1
NUP50-214ENST00000469163 SRYQ05066 204 aa8.8□□□□□ -1
NUP50-214ENST00000469163 LINC01551Q86U37 167 aa8.8□□□□□ -1
NUP50-214ENST00000469163 SUMF2Q8NBJ7 301 aa8.8□□□□□ -1
NUP50-214ENST00000469163 OR4C3Q8NH37 302 aa8.8□□□□□ -1
NUP50-214ENST00000469163 C16orf52Q8NHV5 167 aa8.8□□□□□ -1
NUP50-214ENST00000469163 CNTD2Q9H8S5 307 aa8.8□□□□□ -1
NUP50-214ENST00000469163 TESQ9UGI8 421 aaKnown RBP8.8□□□□□ -1
NUP50-214ENST00000469163 CSAG2Q9Y5P2 127 aa8.8□□□□□ -1
NUP50-214ENST00000469163 PLXND1Q9Y4D7 1925 aa8.8□□□□□ -1
NUP50-214ENST00000469163 A0A1W2PNV4 684 aa8.8□□□□□ -1
NUP50-214ENST00000469163 NDUFB8O95169 186 aa8.8□□□□□ -1
NUP50-214ENST00000469163 CST4P01036 141 aa8.8□□□□□ -1
NUP50-214ENST00000469163 ACVR1BP36896 505 aa8.8□□□□□ -1
NUP50-214ENST00000469163 DUSP3P51452 185 aaPredicted RBP8.8□□□□□ -1
NUP50-214ENST00000469163 EBPQ15125 230 aaKnown RBP8.8□□□□□ -1
NUP50-214ENST00000469163 CSRP2Q16527 193 aa8.8□□□□□ -1
NUP50-214ENST00000469163 OVCH1Q7RTY7 1134 aa8.8□□□□□ -1
NUP50-214ENST00000469163 PRICKLE2Q7Z3G6 844 aa8.8□□□□□ -1
NUP50-214ENST00000469163 ZNF433Q8N7K0 673 aaPredicted RBP8.8□□□□□ -1
NUP50-214ENST00000469163 SAP25Q8TEE9 199 aa8.8□□□□□ -1
NUP50-214ENST00000469163 CLDN23Q96B33 292 aa8.8□□□□□ -1
NUP50-214ENST00000469163 LOXL4Q96JB6 756 aa8.8□□□□□ -1
NUP50-214ENST00000469163 LPAR4Q99677 370 aa8.8□□□□□ -1
NUP50-214ENST00000469163 CITED1Q99966 193 aa8.8□□□□□ -1
NUP50-214ENST00000469163 NXF5Q9H1B4 397 aaKnown RBP8.8□□□□□ -1
NUP50-214ENST00000469163 METTL7AQ9H8H3 244 aa8.8□□□□□ -1
NUP50-214ENST00000469163 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
NUP50-214ENST00000469163 CXorf51AA0A1B0GTR3 108 aa8.79□□□□□ -1
NUP50-214ENST00000469163 FOXS1O43638 330 aa8.79□□□□□ -1
NUP50-214ENST00000469163 TNFSF15O95150 251 aa8.79□□□□□ -1
NUP50-214ENST00000469163 PPIBP23284 216 aaKnown RBP8.79□□□□□ -1
NUP50-214ENST00000469163 MMP11P24347 488 aa8.79□□□□□ -1
NUP50-214ENST00000469163 OR10J1P30954 320 aa8.79□□□□□ -1
NUP50-214ENST00000469163 CLDN12P56749 244 aa8.79□□□□□ -1
NUP50-214ENST00000469163 H3F3AP84243 136 aa8.79□□□□□ -1
NUP50-214ENST00000469163 MIDNQ504T8 468 aa8.79□□□□□ -1
NUP50-214ENST00000469163 DCST2Q5T1A1 773 aa8.79□□□□□ -1
NUP50-214ENST00000469163 MRPL2Q5T653 305 aaKnown RBP8.79□□□□□ -1
NUP50-214ENST00000469163 TCTN3Q6NUS6 607 aa8.79□□□□□ -1
NUP50-214ENST00000469163 MARCH3Q86UD3 253 aa8.79□□□□□ -1
NUP50-214ENST00000469163 OR4C16Q8NGL9 310 aa8.79□□□□□ -1
NUP50-214ENST00000469163 DPH1Q9BZG8 443 aa8.79□□□□□ -1
NUP50-214ENST00000469163 OR11A1Q9GZK7 315 aa8.79□□□□□ -1
NUP50-214ENST00000469163 TMEM9BQ9NQ34 198 aa8.79□□□□□ -1
NUP50-214ENST00000469163 CORO2BQ9UQ03 480 aa8.79□□□□□ -1
NUP50-214ENST00000469163 TRAV27A0A087WT01 109 aa8.79□□□□□ -1
NUP50-214ENST00000469163 IRGMA1A4Y4 181 aa8.79□□□□□ -1
NUP50-214ENST00000469163 ZNF814B7Z6K7 855 aa8.79□□□□□ -1
NUP50-214ENST00000469163 FAM157AC9JC47 383 aa8.79□□□□□ -1
NUP50-214ENST00000469163 RAB29O14966 203 aa8.79□□□□□ -1
NUP50-214ENST00000469163 GPANK1O95872 356 aa8.79□□□□□ -1
NUP50-214ENST00000469163 OR2T7P0C7T2 308 aa8.79□□□□□ -1
NUP50-214ENST00000469163 GABRA4P48169 554 aa8.79□□□□□ -1
NUP50-214ENST00000469163 CDK5Q00535 292 aa8.79□□□□□ -1
NUP50-214ENST00000469163 LCN10Q6JVE6 187 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms