RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 NDUFA8P51970 172 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 NAPAP54920 295 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 OR4D2P58180 307 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ERVPABLB-1P60509 514 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 GABARAPL2P60520 117 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CDK6Q00534 326 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SRSF6Q13247 344 aaKnown RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PEA15Q15121 130 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SHHQ15465 462 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 VAMP3Q15836 100 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 NEDD8Q15843 81 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF699Q32M78 642 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PGGHGQ32M88 737 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF404Q494X3 552 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 C2orf83Q53S99 150 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM41BQ5BJD5 291 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 AKR1C8PQ5T2L2 129 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 LGSNQ5TDP6 509 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 HIST2H3PS2Q5TEC6 136 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SYPL2Q5VXT5 272 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 STEAP4Q687X5 459 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 STEAP1BQ6NZ63 245 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 DNM1P34Q6PK57 102 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 C2orf66Q6UXQ4 117 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CASP12Q6UXS9 341 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 APOOLQ6UXV4 268 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM179Q6ZVK1 233 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SSX6Q7RTT6 188 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF720Q7Z2F6 126 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 LINC01551Q86U37 167 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SERPINA9Q86WD7 417 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CRLF3Q8IUI8 442 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TRAPPC5Q8IUR0 188 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 OR52B4Q8NGK2 314 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 OR2G2Q8NGZ5 317 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 OR2T4Q8NH00 348 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 OR5AK3PQ8NH89 298 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 GNPDA2Q8TDQ7 276 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 RORBQ92753 470 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TADA1Q96BN2 335 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 RPUSD4Q96CM3 377 aaKnown RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 MALSU1Q96EH3 234 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 DTD2Q96FN9 168 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CELF6Q96J87 481 aaKnown RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SMIM8Q96KF7 97 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SENP8Q96LD8 212 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 WRAP53Q9BUR4 548 aaKnown RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PRO1933Q9H354 126 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 IKZF5Q9H5V7 419 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF385DQ9H6B1 395 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CLMPQ9H6B4 373 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 MEAF6Q9HAF1 191 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 LYRM4Q9HD34 91 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SLCO1B3Q9NPD5 702 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PLEKHJ1Q9NW61 149 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PRODH2Q9UF12 536 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PHF11Q9UIL8 331 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 NPIPA1Q9UND3 350 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 RNF6Q9Y252 685 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PALLDQ8WX93 1383 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 XRN1Q8IZH2 1706 aaKnown RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ASTN1O14525 1302 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 KDM3BQ7LBC6 1761 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 CACNA1SQ13698 1873 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 NFAT5O94916 1531 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 TGIF2-C20orf24A0A0A6YYL0 155 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 GLYATL1P3A0A0U1RQE8 302 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OR5H14A6NHG9 310 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 YJEFN3A6XGL0 299 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 COLCA2A8K830 154 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 M0R233 179 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 AZIN1O14977 448 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 FCMRO60667 390 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 DUSP14O95147 198 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 LYPD3O95274 346 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 MPC2O95563 127 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 NDUFB10O96000 172 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 NMBP08949 121 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OR56A5P0C7T3 313 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF44P15621 663 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 NCK1P16333 377 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF14P17017 642 aaPredicted RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 PCMT1P22061 227 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 KDELR1P24390 212 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 IVDP26440 423 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 S100GP29377 79 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 AKT2P31751 481 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 KDELR2P33947 212 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 AQP2P41181 271 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 TTPAP49638 278 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 RAB7AP51149 207 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OR2B8PP59922 312 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 CKS1BP61024 79 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 MXD1Q05195 221 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 KLRC3Q07444 240 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SF3A2Q15428 464 aaKnown RBP2.69□□□□□ -1.98
VPS13D-203ENST00000466732 PLPPR5Q32ZL2 321 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 SLC36A2Q495M3 483 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 CYBRD1Q53TN4 286 aa2.69□□□□□ -1.98
VPS13D-203ENST00000466732 OCIAD2Q56VL3 154 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms