RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 HHLA2Q9UM44 414 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 SESN1Q9Y6P5 492 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 FAM183AA6NL82 134 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 J3QT63 122 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 MMP23AO75900 390 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 NXPH2O95156 264 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 GASTP01350 101 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 HAAOP46952 286 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 NUDT2P50583 147 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 ERVK11-1P61568 191 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 DOC2BQ14184 412 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 PLCXD3Q63HM9 321 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 BAIAP2L2Q6UXY1 529 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 SHFQ7M4L6 423 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 PIGWQ7Z7B1 504 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 OTOSQ8NHW6 89 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 FAM81AQ8TBF8 368 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 TMEM133Q9H2Q1 129 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 ARMC1Q9NVT9 282 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 TAS2R1Q9NYW7 299 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 FRAS1Q86XX4 4008 aa13.59□□□□□ -0.23
UBE2D4-209ENST00000454428 IGLV3-1P01715 115 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 LYNP07948 512 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 HTR1DP28221 377 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 CHATP28329 748 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 HMGA2P52926 109 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 EDDM3BP56851 147 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 HACD2Q6Y1H2 254 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 ZNF676Q8N7Q3 588 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 RAX2Q96IS3 184 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 CLEC7AQ9BXN2 247 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 NIPAL2Q9H841 368 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 GORASP2Q9H8Y8 452 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 FGFR1OP2Q9NVK5 253 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 SLC22A13Q9Y226 551 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 LYVE1Q9Y5Y7 322 aa13.58□□□□□ -0.24
UBE2D4-209ENST00000454428 A0A0U1RQV5 110 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 TMEM82A0PJX8 343 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 H3BUI4 141 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 SELENOFO60613 162 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 SOX14O95416 240 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 MPZP25189 248 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 IL18R1Q13478 541 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 C9orf152Q5JTZ5 239 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 EGFL6Q8IUX8 553 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 TPRX1Q8N7U7 411 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 ASCC1Q8N9N2 400 aaKnown RBP13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 NOL4LQ96MY1 436 aaPredicted RBP13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 RCHY1Q96PM5 261 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 CMC2Q9NRP2 79 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 FAM206AQ9NX38 181 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 SCOCQ9UIL1 159 aa13.57□□□□□ -0.24
UBE2D4-209ENST00000454428 HERC2O95714 4834 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 ALMS1Q8TCU4 4167 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 PQLC2LA1A4F0 135 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 F8VVB4 439 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 F8VWA3 439 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 FABP3P05413 133 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 LYL1P12980 280 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 SLC6A1P30531 599 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 OR3A4PP47883 348 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 PSME3P61289 254 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 MEF2CQ06413 473 aaPredicted RBP13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 RIPPLY1Q0D2K3 151 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 ZNF573Q86YE8 665 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 OR8H2Q8N162 312 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 RNF148Q8N7C7 305 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 KLHL30-AS1Q8NEE0 82 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 Q8NFD4 153 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 OR2T33Q8NG76 320 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 THEM6Q8WUY1 208 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 CAPSLQ8WWF8 208 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 STMN2Q93045 179 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 EFCAB1Q9HAE3 211 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 IL1RAPQ9NPH3 570 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 DPM3Q9P2X0 92 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 BAIAP2Q9UQB8 552 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 PIGLQ9Y2B2 252 aa13.56□□□□□ -0.24
UBE2D4-209ENST00000454428 NUDT19A8MXV4 375 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 HMGB1P1B2RPK0 211 aaPredicted RBP13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 NDUFAB1O14561 156 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 DNAJC8O75937 253 aaPredicted RBP13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 NRASP01111 189 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 BRS3P32247 399 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 TMEM42Q69YG0 159 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 GDPD3Q7L5L3 318 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 SBSPONQ8IVN8 264 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 ZNF454Q8N9F8 522 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 OR51E1Q8TCB6 317 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 TEAD3Q99594 435 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 MYLK2Q9H1R3 596 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 GPR84Q9NQS5 396 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 ZFP57Q9NU63 452 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 POLDIP2Q9Y2S7 368 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 LINC00312Q9Y6C7 94 aa13.55□□□□□ -0.24
UBE2D4-209ENST00000454428 RIIAD1A6NNX1 92 aa13.54□□□□□ -0.24
UBE2D4-209ENST00000454428 IFNGP01579 166 aa13.54□□□□□ -0.24
UBE2D4-209ENST00000454428 IGLV1-47P01700 117 aa13.54□□□□□ -0.24
UBE2D4-209ENST00000454428 ATP6V1B1P15313 513 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms