RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 C2orf76Q3KRA6 126 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 ELP2Q6IA86 826 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 BEND4Q6ZU67 534 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 LYG2Q86SG7 212 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 OR1K1Q8NGR3 316 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 THAP6Q8TBB0 222 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 NANOS1Q8WY41 292 aaKnown RBP13.78□□□□□ -0.2
SNX17-204ENST00000453453 VKORC1Q9BQB6 163 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 ZNF629Q9UEG4 869 aaPredicted RBP13.78□□□□□ -0.2
SNX17-204ENST00000453453 PCDHB10Q9UN67 800 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 LRP12Q9Y561 859 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 TIMM10BQ9Y5J6 103 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 INTS1Q8N201 2190 aaKnown RBP13.78□□□□□ -0.2
SNX17-204ENST00000453453 SHANK1Q9Y566 2161 aa13.78□□□□□ -0.2
SNX17-204ENST00000453453 ZZEF1O43149 2961 aa13.77□□□□□ -0.2
SNX17-204ENST00000453453 ATRXP46100 2492 aa13.77□□□□□ -0.2
SNX17-204ENST00000453453 TRBV6-7A0A0A0MS04 114 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 PRSS44E7EML9 344 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 RER1O15258 196 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 IL18BPO95998 194 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 CYB5AP00167 134 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 ITGA5P08648 1049 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 CD79AP11912 226 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 TPT1P13693 172 aaKnown RBP13.77□□□□□ -0.21
SNX17-204ENST00000453453 TBPP20226 339 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 RAB6AP20340 208 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 ZBTB25P24278 435 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 MAGEB1P43366 347 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 GRB2P62993 217 aaKnown RBP13.77□□□□□ -0.21
SNX17-204ENST00000453453 DHRS2Q13268 280 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 NKAPLQ5M9Q1 402 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 DRAM2Q6UX65 266 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 LDLRAD3Q86YD5 345 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 PUSL1Q8N0Z8 303 aaKnown RBP13.77□□□□□ -0.21
SNX17-204ENST00000453453 INO80EQ8NBZ0 244 aaPredicted RBP13.77□□□□□ -0.21
SNX17-204ENST00000453453 NAXEQ8NCW5 288 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 SLC30A7Q8NEW0 376 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 MITD1Q8WV92 249 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 SLC25A28Q96A46 364 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 FBXO17Q96EF6 278 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 C12orf57Q99622 126 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 USB1Q9BQ65 265 aaKnown RBP13.77□□□□□ -0.21
SNX17-204ENST00000453453 SEC11CQ9BY50 192 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 CHST6Q9GZX3 395 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 ZFP57Q9NU63 452 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 PLEK2Q9NYT0 353 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 CACNA1CQ13936 2221 aa13.77□□□□□ -0.21
SNX17-204ENST00000453453 A0A096LPE4 126 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 A0A1W2PPZ6 126 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 PCP4L1A6NKN8 68 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 ZNF736B4DX44 427 aaPredicted RBP13.76□□□□□ -0.21
SNX17-204ENST00000453453 SGCEO43556 437 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 SCGNO76038 276 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 CGAP01215 116 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 AMY2AP04746 511 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 FOLR2P14207 255 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 BDKRB2P30411 391 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 HOXC12P31275 282 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 CA7P43166 264 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 KIR3DL2P43630 455 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 EFNB2P52799 333 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 HIST1H3AP68431 136 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 ECH1Q13011 328 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 PLA2G7Q13093 441 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 P2RY6Q15077 328 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 RAB35Q15286 201 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 HIST2H3PS2Q5TEC6 136 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 RAB12Q6IQ22 244 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 HIST2H3AQ71DI3 136 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 ZNF610Q8N9Z0 462 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 OR1J2Q8NGS2 313 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 TSEN15Q8WW01 171 aaKnown RBP13.76□□□□□ -0.21
SNX17-204ENST00000453453 RND1Q92730 232 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 ATG5Q9H1Y0 275 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 OPN3Q9H1Y3 402 aaPredicted RBP13.76□□□□□ -0.21
SNX17-204ENST00000453453 WDR13Q9H1Z4 485 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 MMP26Q9NRE1 261 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 CKLFQ9UBR5 152 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 NOP16Q9Y3C1 178 aaKnown RBP13.76□□□□□ -0.21
SNX17-204ENST00000453453 USP24Q9UPU5 2620 aa13.76□□□□□ -0.21
SNX17-204ENST00000453453 NCOA6Q14686 2063 aaPredicted RBP13.76□□□□□ -0.21
SNX17-204ENST00000453453 RP1L1Q8IWN7 2480 aaPredicted RBP13.75□□□□□ -0.21
SNX17-204ENST00000453453 TEX13DA0A0J9YY54 714 aaPredicted RBP13.75□□□□□ -0.21
SNX17-204ENST00000453453 LDLRAD4O15165 306 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 CD2P06729 351 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 ZNF32P17041 273 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 IGHV1-2P23083 117 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 ARR3P36575 388 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 MEOX2P50222 304 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 PRKXP51817 358 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 FOXG1P55316 489 aaPredicted RBP13.75□□□□□ -0.21
SNX17-204ENST00000453453 TAS2R31P59538 309 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 CYCSP99999 105 aaKnown RBP13.75□□□□□ -0.21
SNX17-204ENST00000453453 GUCA2BQ16661 112 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 FAM74A1Q5RGS3 127 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 AWAT2Q6E213 333 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 PRSS35Q8N3Z0 413 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 C1orf162Q8NEQ5 155 aaPredicted RBP13.75□□□□□ -0.21
SNX17-204ENST00000453453 OR1S2Q8NGQ3 325 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 RNF141Q8WVD5 230 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms