RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FOXO1Q12778 655 aa7.6□□□□□ -1.19
PTPN3-204ENST00000446349 ZNF658BQ4V348 819 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-204ENST00000446349 OR10K2Q6IF99 312 aa7.6□□□□□ -1.19
PTPN3-204ENST00000446349 DRAXINQ8NBI3 349 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-204ENST00000446349 PIK3IP1Q96FE7 263 aa7.6□□□□□ -1.19
PTPN3-204ENST00000446349 PIMREGQ9BSJ6 248 aa7.6□□□□□ -1.19
PTPN3-204ENST00000446349 TPPP3Q9BW30 176 aa7.6□□□□□ -1.19
PTPN3-204ENST00000446349 RAB18Q9NP72 206 aa7.6□□□□□ -1.19
PTPN3-204ENST00000446349 FBXL2Q9UKC9 423 aa7.6□□□□□ -1.19
PTPN3-204ENST00000446349 FITM1A5D6W6 292 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 PPP5D1E7EU14 171 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 CA6P23280 308 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 AKR1C3P42330 323 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 CDK5Q00535 292 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 VN1R4Q7Z5H5 301 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 NRARPQ7Z6K4 114 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 C20orf196Q8IYI0 205 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 GDF15Q99988 308 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 GHITMQ9H3K2 345 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 SEC14L6B5MCN3 397 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 SIAH2O43255 324 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 EPHA2P29317 976 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 FGF9P31371 208 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 MRM1Q6IN84 353 aaKnown RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 LYG1Q8N1E2 194 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 BPIFCQ8NFQ6 507 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 MAP6Q96JE9 813 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 SFXN3Q9BWM7 321 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 ZMAT3Q9HA38 289 aaKnown RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 CSAG2Q9Y5P2 127 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 CTSSP25774 331 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 RPL12P30050 165 aaKnown RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 RAG2P55895 527 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 PJVKQ0ZLH3 352 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 SURF2Q15527 256 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 GGNBP1Q5YKI7 109 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 TMEM104Q8NE00 496 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 CHST2Q9Y4C5 530 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 PUS1Q9Y606 427 aaKnown RBP eCLIP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 AQP7O14520 342 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 RTP5Q14D33 572 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 C1QTNF12Q5T7M4 302 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 OR2T2Q6IF00 324 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 ELOVL5Q9NYP7 299 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 CLN8Q9UBY8 286 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 TMEM235A6NFC5 223 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 A6NIN4 97 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 CEACAM6P40199 344 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 COL9A2Q14055 689 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 SF3B6Q9Y3B4 125 aaKnown RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 FGF7P21781 194 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 POLR2IP36954 125 aaKnown RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 RPS19P39019 145 aaKnown RBP7.59□□□□□ -1.19
PTPN3-204ENST00000446349 SLC37A1P57057 533 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 SMIM4Q8WVI0 70 aa7.59□□□□□ -1.19
PTPN3-204ENST00000446349 SPAARA0A1B0GVQ0 90 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 SLC25A6P12236 298 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 PRF1P14222 555 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 TLE1Q04724 770 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 ADIRFQ15847 76 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 SPATA46Q5T0L3 261 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 TCTEX1D1Q8N7M0 179 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 OR10V1Q8NGI7 309 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 LHX4Q969G2 390 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 RPS10P46783 165 aaKnown RBP7.58□□□□□ -1.2
PTPN3-204ENST00000446349 ZP4Q12836 540 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 DVL3Q92997 716 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-204ENST00000446349 HGDQ93099 445 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF275Q9NSD4 429 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-204ENST00000446349 A0A1W2PQF6 199 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 ANGPTL7O43827 346 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 CDAP32320 146 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 ACSM6Q6P461 480 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 HSD17B11Q8NBQ5 300 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 STXBP6Q8NFX7 210 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 HSD17B10Q99714 261 aaKnown RBP7.58□□□□□ -1.2
PTPN3-204ENST00000446349 MYF5P13349 255 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 HIST1H1DP16402 221 aaKnown RBP7.58□□□□□ -1.2
PTPN3-204ENST00000446349 NME2P22392 152 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 ID1P41134 155 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 OPRK1P41145 380 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 KCNMB1Q16558 191 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 SLC25A35Q3KQZ1 300 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF774Q6NX45 483 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 PERPQ96FX8 193 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 H7BYZ3 331 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 FAM122BQ7Z309 247 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 K7ESF4 209 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 IZUMO4Q1ZYL8 232 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 TMUB2Q71RG4 321 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 OR2M3Q8NG83 312 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 ADGRG7Q96K78 797 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 C11orf54Q9H0W9 315 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-204ENST00000446349 PCDHGA9Q9Y5G4 932 aaKnown RBP7.58□□□□□ -1.2
PTPN3-204ENST00000446349 OR4E1P0C645 316 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 MAGEA5P43359 124 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 FAHD2BQ6P2I3 314 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-204ENST00000446349 FAHD2AQ96GK7 314 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 TMEM208Q9BTX3 173 aa7.58□□□□□ -1.2
PTPN3-204ENST00000446349 UQCC1Q9NVA1 299 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms