RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 WDR13Q9H1Z4 485 aa12.05□□□□□ -0.48
HOXC4-202ENST00000430889 CRIM1Q9NZV1 1036 aa12.05□□□□□ -0.48
HOXC4-202ENST00000430889 SPRR3Q9UBC9 169 aa12.05□□□□□ -0.48
HOXC4-202ENST00000430889 A0A096LPE4 126 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 A0A1W2PPZ6 126 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 PQLC2LA1A4F0 135 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 ARGFXA6NJG6 315 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 CSTBP04080 98 aaKnown RBP12.04□□□□□ -0.48
HOXC4-202ENST00000430889 SFTPBP07988 381 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 PMELP40967 661 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 ANKRD55Q3KP44 614 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 C9orf135Q5VTT2 229 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 PLCXD3Q63HM9 321 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 RGS7BPQ6MZT1 257 aaPredicted RBP12.04□□□□□ -0.48
HOXC4-202ENST00000430889 OSR2Q8N2R0 312 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 OR10AD1Q8NGE0 317 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 PIGCQ92535 297 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 FAAP24Q9BTP7 215 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 ZNF552Q9H707 407 aaPredicted RBP12.04□□□□□ -0.48
HOXC4-202ENST00000430889 RAB18Q9NP72 206 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 ANXA10Q9UJ72 324 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 SLC7A11Q9UPY5 501 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 PTPRBP23467 1997 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 MED12LQ86YW9 2145 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 CUL9Q8IWT3 2517 aa12.04□□□□□ -0.48
HOXC4-202ENST00000430889 GEMIN2O14893 280 aaKnown RBP12.03□□□□□ -0.48
HOXC4-202ENST00000430889 PLATP00750 562 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 CST4P01036 141 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 FCGR3AP08637 254 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 SERPINF1P36955 418 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ECI1P42126 302 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 AP2S1P53680 142 aaPredicted RBP12.03□□□□□ -0.48
HOXC4-202ENST00000430889 RAB14P61106 215 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 BAMBIQ13145 260 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 AANATQ16613 207 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 PIGYQ3MUY2 71 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 CHRFAM7AQ494W8 412 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ZNF766Q5HY98 468 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 NKAPLQ5M9Q1 402 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 Q6ZPA2 131 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 KCTD9Q7L273 389 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 CALHM1Q8IU99 346 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 FBXL14Q8N1E6 418 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 OR56B2PQ8NGI1 322 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 HPSE2Q8WWQ2 592 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 DMRTA2Q96SC8 542 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 LIME1Q9H400 295 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 GP6Q9HCN6 339 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ASCL3Q9NQ33 180 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ZNF701Q9NV72 531 aaPredicted RBP12.03□□□□□ -0.48
HOXC4-202ENST00000430889 COMMD9Q9P000 198 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 GPR160Q9UJ42 338 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ZNF850A8MQ14 1090 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 BCL2L11O43521 198 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 IL18BPO95998 194 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 LYL1P12980 280 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 PI3P19957 117 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 GLRA1P23415 457 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 PTGER4P35408 488 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ARR3P36575 388 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 RBM11P57052 281 aaKnown RBP12.03□□□□□ -0.48
HOXC4-202ENST00000430889 UBA52P62987 128 aaKnown RBP12.03□□□□□ -0.48
HOXC4-202ENST00000430889 IL15RAQ13261 267 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ALKAL2Q6UX46 152 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ACOT7LQ6ZUV0 252 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 OR5M9Q8NGP3 310 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 APOBEC3DQ96AK3 386 aaPredicted RBP12.03□□□□□ -0.48
HOXC4-202ENST00000430889 ZNF75AQ96N20 296 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 RDH8Q9NYR8 311 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 PRSS50Q9UI38 385 aa12.03□□□□□ -0.48
HOXC4-202ENST00000430889 OTOGLQ3ZCN5 2332 aa12.02□□□□□ -0.48
HOXC4-202ENST00000430889 TRGV5A0A0B4J1U4 118 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 C5orf49A4QMS7 147 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 SHOXO15266 292 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 PDCD6O75340 191 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 FTH1P19P0C7X4 201 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 TNFSF10P50591 281 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 SLC9A3R2Q15599 337 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 ELP2Q6IA86 826 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 DHRS11Q6UWP2 260 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 SAXO1Q8IYX7 474 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 BCL2L2Q92843 193 aaPredicted RBP12.02□□□□□ -0.49
HOXC4-202ENST00000430889 DHRS9Q9BPW9 319 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 RNF126Q9BV68 326 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 MBD2Q9UBB5 411 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 ZNF175Q9Y473 711 aa12.02□□□□□ -0.49
HOXC4-202ENST00000430889 hCG_1807616A0A1W2PRN6 198 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A10PA6NDY2 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A18PA6NE21 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A16PA6NEW6 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 MFSD2BA6NFX1 497 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A20PA6NIJ5 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A8PA6NJQ4 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A7PA6NKC0 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A22PA8MWA6 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A12PA8MX19 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A5PA8MXJ8 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A23PA8MXZ1 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 H0YIZ8 118 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms