RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 NARFLQ9H6Q4 476 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 CNTD2Q9H8S5 307 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 OR14J1Q9UGF5 321 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 RSL24D1Q9UHA3 163 aaKnown RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 DAPK2Q9UIK4 370 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 HRNRQ86YZ3 2850 aaPredicted RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 IGHV3OR15-7A0A075B7D8 119 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 OOEPA6NGQ2 149 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 NOTOA8MTQ0 251 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 SRRM5B3KS81 715 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 LGALS8O00214 317 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 SLC17A2O00624 439 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF205O95201 554 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 PTBP3O95758 552 aaKnown RBP7.13□□□□□ -1.27
TRIM48-201ENST00000417545 IL1AP01583 271 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 PGA5P0DJD9 388 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 ARSBP15848 533 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 PAX1P15863 534 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 SLC25A16P16260 332 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 BCL3P20749 454 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 MPZP25189 248 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 TGFBR1P36897 503 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 MDH2P40926 338 aaKnown RBP7.13□□□□□ -1.27
TRIM48-201ENST00000417545 GABRA2P47869 451 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 OR10A3P58181 314 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 BTG1P62324 171 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 SCN1BQ07699 218 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 HNRNPA0Q13151 305 aaKnown RBP7.13□□□□□ -1.27
TRIM48-201ENST00000417545 RIN1Q13671 783 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 SHEQ5VZ18 495 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 SFRP4Q6FHJ7 346 aaPredicted RBP7.13□□□□□ -1.27
TRIM48-201ENST00000417545 ASPHD2Q6ICH7 369 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 NLRC3Q7RTR2 1065 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 FAM58AQ8N1B3 248 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 SPICQ8N5J4 248 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 PXT1Q8NFP0 134 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 OR10K1Q8NGX5 313 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 IGFBPL1Q8WX77 278 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 AP3S1Q92572 193 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 PHF21AQ96BD5 680 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 ISOC1Q96CN7 298 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 TLNRD1Q9H1K6 362 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 RASL12Q9NYN1 266 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 NLKQ9UBE8 527 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 GHRLQ9UBU3 117 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 STEAP1Q9UHE8 339 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 WIPI2Q9Y4P8 454 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 PTPN13Q12923 2485 aa7.13□□□□□ -1.27
TRIM48-201ENST00000417545 CRYBG3Q68DQ2 2970 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 LRBAP50851 2863 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 IFITM5A6NNB3 132 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 AIPO00170 330 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 WNT9BO14905 357 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 BPNT1O95861 308 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 MPIG6BO95866 241 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 CLEC2LP0C7M8 214 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 CALCBP10092 127 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 GTF2F2P13984 249 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF44P15621 663 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 RPS2P15880 293 aaKnown RBP7.12□□□□□ -1.27
TRIM48-201ENST00000417545 MUC1P15941 1255 aaPredicted RBP7.12□□□□□ -1.27
TRIM48-201ENST00000417545 ADRA2CP18825 462 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 CAV3P56539 151 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 CLDN12P56749 244 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 ZP1P60852 638 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 DGUOKQ16854 277 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 FAM76BQ5HYJ3 339 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 SFXN4Q6P4A7 337 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 SLC16A12Q6ZSM3 486 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 SLC36A1Q7Z2H8 476 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 TGIF2LYQ8IUE0 185 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 OSR2Q8N2R0 312 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 GCSAMQ8N6F7 178 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 C19orf18Q8NEA5 215 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 OR4D6Q8NGJ1 314 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 NDNFQ8TB73 568 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 TBC1D15Q8TC07 691 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 FAM46BQ96A09 425 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 C12orf43Q96C57 262 aaKnown RBP7.12□□□□□ -1.27
TRIM48-201ENST00000417545 RAB39BQ96DA2 213 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 Q96MF0 132 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 FOXC2Q99958 501 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 URM1Q9BTM9 101 aaKnown RBP7.12□□□□□ -1.27
TRIM48-201ENST00000417545 MRI1Q9BV20 369 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 TMEM59Q9BXS4 323 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 BPESC1Q9GZL8 116 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 RHOFQ9HBH0 211 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 BATF3Q9NR55 127 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 RBFOX1Q9NWB1 397 aaKnown RBP7.12□□□□□ -1.27
TRIM48-201ENST00000417545 DCAF16Q9NXF7 216 aa7.12□□□□□ -1.27
TRIM48-201ENST00000417545 SHISA3A0PJX4 238 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 OR2AT4A6NND4 320 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 H3BMQ9 156 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 SH2D1BO14796 132 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 ADAM20O43506 726 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 NDUFA2O43678 99 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 RP2O75695 350 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 GYPAP02724 150 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 MGMTP16455 207 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 EGR1P18146 543 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms