RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 A0A1W2PPE2 198 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 A0A1W2PR64 198 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 A0A1W2PRV1 198 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 ANKRD61A6NGH8 418 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 SYT7O43581 403 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 ANGPTL7O43827 346 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 CIB2O75838 187 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 POLR2IP36954 125 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 IL24Q13007 206 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 ODF4Q2M2E3 257 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 TMEM200BQ69YZ2 307 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 ANGPTL5Q86XS5 388 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 MKXQ8IYA7 352 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 RFKQ969G6 155 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 GABARAPL3Q9BY60 117 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 FAM234AQ9H0X4 552 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 MEGF9Q9H1U4 602 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 RIBC2Q9H4K1 309 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 PLEKHA1Q9HB21 404 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 OR14J1Q9UGF5 321 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 OAZ3Q9UMX2 235 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 WNK1Q9H4A3 2382 aa14.35□□□□□ -0.11
PDLIM2-208ENST00000416159 FAM230AA0A1W2PPH8 454 aa14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 TK1P04183 234 aa14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 CEBPDP49716 269 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 ERVK11-1P61568 191 aa14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 CALHM1Q8IU99 346 aa14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 OR10H4Q8NGA5 316 aa14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 TRMT10AQ8TBZ6 339 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 RORBQ92753 470 aa14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 SSX3Q99909 188 aa14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 RBM4BQ9BQ04 359 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 USE1Q9NZ43 259 aa14.34□□□□□ -0.11
PDLIM2-208ENST00000416159 KCNAB3O43448 404 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 GATBO75879 557 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 APOL3O95236 402 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 SERPINA3P01011 423 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 CHRM2P08172 466 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 FUT6P51993 359 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 CDC42P60953 191 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 UBE2V2Q15819 145 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 AANATQ16613 207 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 ASPHD2Q6ICH7 369 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 C11orf42Q8N5U0 333 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 OR4M1Q8NGD0 313 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 TRUB1Q8WWH5 349 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 EME1Q96AY2 570 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 C10orf35Q96D05 121 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 TCF7L1Q9HCS4 588 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 PKD1L1Q8TDX9 2849 aa14.33□□□□□ -0.12
PDLIM2-208ENST00000416159 SAC3D1A6NKF1 404 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 H3BUX3 64 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 K7N7A8 449 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 ERVFRD-1P60508 538 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 FAM220AQ7Z4H9 259 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 BATF2Q8N1L9 274 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 C17orf50Q8WW18 174 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 AJUBAQ96IF1 538 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 CHST5Q9GZS9 411 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 PPA2Q9H2U2 334 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 MMP27Q9H306 513 aa14.32□□□□□ -0.12
PDLIM2-208ENST00000416159 H3BSH0 61 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 CCL3L1P16619 93 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 LGALS4P56470 323 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 COL10A1Q03692 680 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 ZNF85Q03923 595 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 ZNF273Q14593 569 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 CNN3Q15417 329 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 LRRC75BQ2VPJ9 315 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 SLC35E4Q6ICL7 350 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 PRSS35Q8N3Z0 413 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 BORCS8Q96FH0 119 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 CEP19Q96LK0 163 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 MTCH1Q9NZJ7 389 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 FBLN5Q9UBX5 448 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 GNG8Q9UK08 70 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 ORC6Q9Y5N6 252 aa14.31□□□□□ -0.12
PDLIM2-208ENST00000416159 IGKV1-27A0A075B6S5 117 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 UBCP0CG48 685 aaKnown RBP14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 ISL1P61371 349 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 DEFA6Q01524 100 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 TP53I3Q53FA7 332 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 TMEM244Q5VVB8 128 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 KCTD20Q7Z5Y7 419 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 EGFL6Q8IUX8 553 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 ASCC1Q8N9N2 400 aaKnown RBP14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 PP6455Q8WZ26 134 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 SEBOXQ9HB31 216 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 RAB18Q9NP72 206 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 IMPAD1Q9NX62 359 aa14.3□□□□□ -0.12
PDLIM2-208ENST00000416159 LOC107986453A0A1B0GWG9 222 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 C17orf98A8MV24 154 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 PIPP12273 146 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 COX7A1P24310 79 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 GABRA5P31644 462 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 KIR3DL2P43630 455 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 ATP1B3P54709 279 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 ACTC1P68032 377 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 ACTA1P68133 377 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms