RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CNTD2Q9H8S5 307 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 RHOFQ9HBH0 211 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 PCDHB16Q9NRJ7 776 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 RNF7Q9UBF6 113 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 GHRLQ9UBU3 117 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 IFITM5A6NNB3 132 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 TRAPPC2LH3BP13 241 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 AIPO00170 330 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 ZNF780AO75290 641 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 UBBP0CG47 229 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 RPS19P39019 145 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 OR10A3P58181 314 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 RAB11BQ15907 218 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 AWAT2Q6E213 333 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 SFXN4Q6P4A7 337 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 CRIP3Q6Q6R5 217 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 CLEC2AQ6UVW9 174 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 NDNFQ8TB73 568 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 CCL17Q92583 94 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 SLC25A46Q96AG3 418 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 REG4Q9BYZ8 158 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 METTL9Q9H1A3 318 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 GSX1Q9H4S2 264 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 SMURF1Q9HCE7 757 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 STEAP1Q9UHE8 339 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 MRPS28Q9Y2Q9 187 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 NAV3Q8IVL0 2385 aa13.91□□□□□ -0.18
TSPAN4-208ENST00000409531 RNF223E7ERA6 249 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 SMAD7O15105 426 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 SPRY1O43609 319 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 CDC14BO60729 498 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 NOS1APO75052 506 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 LY6HO94772 140 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 CLEC2LP0C7M8 214 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 PGA5P0DJD9 388 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 OR3A4PP47883 348 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 BMXP51813 675 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 GPR176Q14439 515 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 SPCS2Q15005 226 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 RSU1Q15404 277 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 ZNF826PQ6ZT77 177 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 RNF144BQ7Z419 303 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 PEG10Q86TG7 708 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 NR2C2APQ86WQ0 139 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 ZNF525Q8N782 197 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 POC1AQ8NBT0 407 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 TBC1D15Q8TC07 691 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 LRRC29Q8WV35 223 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 CEP19Q96LK0 163 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 SMR3AQ99954 134 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 MRI1Q9BV20 369 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 ELL3Q9HB65 397 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 TMEM106BQ9NUM4 274 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 ING4Q9UNL4 249 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 NPTNQ9Y639 398 aa13.9□□□□□ -0.18
TSPAN4-208ENST00000409531 A0A0G2JK05 382 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 SMIM30A4D0T7 59 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 A6NHS1 94 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 SYNGR1O43759 233 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 RHBDL1O75783 438 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 CSF3P09919 207 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 SOX6P35712 828 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 PMELP40967 661 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 RORCP51449 518 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 HNRNPA0Q13151 305 aaKnown RBP13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 FAM166AQ6J272 317 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 GLIPR1L1Q6UWM5 242 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 ASCL4Q6XD76 172 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 OR4D6Q8NGJ1 314 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 FAM168AQ92567 244 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 SLAMF9Q96A28 289 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 CHODLQ9H9P2 273 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 RASL12Q9NYN1 266 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 IL36GQ9NZH8 169 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 DAPK2Q9UIK4 370 aa13.9□□□□□ -0.19
TSPAN4-208ENST00000409531 CSPG4Q6UVK1 2322 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 IGHV4-30-2A0A087WSY4 118 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 SRRM5B3KS81 715 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 CLDN25C9JDP6 229 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 TMEM178BH3BS89 294 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 AKR7A2O43488 359 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 ANGPTL7O43827 346 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 KDM4BO94953 1096 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 NXPH2O95156 264 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 BPNT1O95861 308 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 CSTBP04080 98 aaKnown RBP13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 ARSBP15848 533 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 GLRA1P23415 457 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 COL8A2P25067 703 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 CAV3P56539 151 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 TMEM33P57088 247 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 DGUOKQ16854 277 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 HES5Q5TA89 166 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 FIP1L1Q6UN15 594 aaKnown RBP13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 YIPF5Q969M3 257 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 TIMD4Q96H15 378 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 NKX3-1Q99801 234 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 NRIP2Q9BQI9 281 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 CST11Q9H112 138 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 TREM2Q9NZC2 230 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms