RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TEAD3Q99594 435 aa8.31□□□□□ -1.08
NIF3L1-202ENST00000409020 MDFIQ99750 246 aa8.31□□□□□ -1.08
NIF3L1-202ENST00000409020 FOXB1Q99853 325 aa8.31□□□□□ -1.08
NIF3L1-202ENST00000409020 TMPRSS13Q9BYE2 586 aa8.31□□□□□ -1.08
NIF3L1-202ENST00000409020 PLK3Q9H4B4 646 aa8.31□□□□□ -1.08
NIF3L1-202ENST00000409020 RHCGQ9UBD6 479 aa8.31□□□□□ -1.08
NIF3L1-202ENST00000409020 FZR1Q9UM11 496 aa8.31□□□□□ -1.08
NIF3L1-202ENST00000409020 CMAHPQ9Y471 501 aa8.31□□□□□ -1.08
NIF3L1-202ENST00000409020 YLPM1P49750 1951 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 COLCA2A8K830 154 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 PRR23D1E9PI22 279 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 NME4O00746 187 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 CD5LO43866 347 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 CRLF1O75462 422 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 OR6A2O95222 327 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 MT-ND1P03886 318 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 PRR23D2P0DMB1 279 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 KDELR2P33947 212 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 ARR3P36575 388 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 CHRNB3Q05901 458 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 ZP4Q12836 540 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 SNTB2Q13425 540 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 TBCEQ15813 527 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 GSG1Q2KHT4 349 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 TMEM249Q2WGJ8 235 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 C3orf36Q3SXR2 165 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 PYY3Q5JQD4 70 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 GDPGP1Q6ZNW5 385 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 LRP11Q86VZ4 500 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 LRRC28Q86X40 367 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 PAQR4Q8N4S7 273 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 CLDN22Q8N7P3 220 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 NUP37Q8NFH4 326 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 OR2T12Q8NG77 320 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 TMEM239Q8WW34 195 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 ACOT12Q8WYK0 555 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 FAM168AQ92567 244 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 MALSU1Q96EH3 234 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 MBOAT4Q96T53 435 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 BARHL1Q9BZE3 327 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 CHST5Q9GZS9 411 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 YAE1D1Q9NRH1 226 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 ZNF222Q9UK12 451 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 NDRG4Q9ULP0 352 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 A4GNTQ9UNA3 340 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 CDH10Q9Y6N8 788 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 IGKV1D-43A0A0B4J1Z2 117 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 IGHV4-61A0A0C4DH41 118 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 ELOVL7A1L3X0 281 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 A8MWP6 167 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 B9A039 149 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 LYNX1G3V0Z9 82 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 M0R143 59 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 FFAR1O14842 300 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 LYRM1O43325 122 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 HOXB5P09067 269 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 LYNX1P0DP58 116 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 CCL2P13500 99 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 ZNF35P13682 527 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 ZNF44P15621 663 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 HOXB6P17509 224 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 HOXA5P20719 270 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 GABRR1P24046 479 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 RAB1AP62820 205 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 EFNB3Q15768 340 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 HIST3H3Q16695 136 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 SERPINA12Q8IW75 414 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 SLC22A24Q8N4F4 322 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 PXT1Q8NFP0 134 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 ASB10Q8WXI3 467 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 SLC25A44Q96H78 314 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 TNFRSF13CQ96RJ3 184 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 PPP1R3EQ9H7J1 279 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 B3GAT2Q9NPZ5 323 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 SMCO4Q9NRQ5 59 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 MAN2C1Q9NTJ4 1040 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 SLCO1C1Q9NYB5 712 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 FBXO7Q9Y3I1 522 aa8.3□□□□□ -1.08
NIF3L1-202ENST00000409020 LOC100130705A0A1B0GUX0 176 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 PRODHO43272 600 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 SPDEFO95238 335 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 SLC2A10O95528 541 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 PNPP00491 289 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 MT-ND4LP03901 98 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 CD2P06729 351 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 NPSP0C0P6 89 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 TSPAN19P0C672 248 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 SULT1A3P0DMM9 295 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 SULT1A4P0DMN0 295 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 IGHV4-31P0DP07 118 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 MAKP20794 623 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 CDAP32320 146 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 CD200P41217 278 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 CDX1P47902 265 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 RAG2P55895 527 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 ARF6P62330 175 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 FMODQ06828 376 aa8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 LOXL1Q08397 574 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-202ENST00000409020 GGTLC2Q14390 218 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms