RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 OR51F2Q8NH61 342 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 CEP19Q96LK0 163 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 GAL3ST1Q99999 423 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 TMEM246Q9BRR3 403 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 HES4Q9HCC6 221 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 SNTG1Q9NSN8 517 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 TXNL4BQ9NX01 149 aaKnown RBP24.56■■□□□ 1.52
USP42-202ENST00000404008 SSR3Q9UNL2 185 aa24.56■■□□□ 1.52
USP42-202ENST00000404008 YLPM1P49750 1951 aaKnown RBP24.56■■□□□ 1.52
USP42-202ENST00000404008 ANGPTL7O43827 346 aa24.55■■□□□ 1.52
USP42-202ENST00000404008 TFAP2AP05549 437 aa24.55■■□□□ 1.52
USP42-202ENST00000404008 MUC1P15941 1255 aaPredicted RBP24.55■■□□□ 1.52
USP42-202ENST00000404008 MICBQ29980 383 aa24.55■■□□□ 1.52
USP42-202ENST00000404008 BATF2Q8N1L9 274 aa24.55■■□□□ 1.52
USP42-202ENST00000404008 OR13F1Q8NGS4 319 aa24.55■■□□□ 1.52
USP42-202ENST00000404008 EXOSC4Q9NPD3 245 aaKnown RBP24.55■■□□□ 1.52
USP42-202ENST00000404008 IGKV1-12A0A0C4DH73 117 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 F8VVB4 439 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 F8VWA3 439 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 IGKV1D-12P01611 117 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 TMEM225BP0DP42 221 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 OR3A4PP47883 348 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 KCNJ8Q15842 424 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 JAGN1Q8N5M9 183 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 PNLDC1Q8NA58 520 aaKnown RBP24.54■■□□□ 1.52
USP42-202ENST00000404008 TNFAIP8L1Q8WVP5 186 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 TMIGD2Q96BF3 282 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 C12orf43Q96C57 262 aaKnown RBP24.54■■□□□ 1.52
USP42-202ENST00000404008 CHCHD6Q9BRQ6 235 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 SMURF1Q9HCE7 757 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 DNAJB11Q9UBS4 358 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 HIVEP1P15822 2718 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 NXPH2O95156 264 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 PTGFRP43088 359 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 NPBWR2P48146 333 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 ALDH3B2P48448 385 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 LMO4P61968 165 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 SMIM21Q3B7S5 101 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 ACP7Q6ZNF0 438 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 Q8IYB0 196 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 COX4I2Q96KJ9 171 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 FAM192AQ9GZU8 254 aa24.54■■□□□ 1.52
USP42-202ENST00000404008 TRAV1-2A0A0B4J238 106 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 CEACAM18A8MTB9 384 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 TRAPPC2LH3BP13 241 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 KDM4BO94953 1096 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 IGHV2-5P01817 119 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 BCL3P20749 454 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 IL2RGP31785 369 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 DCDC5Q6ZRR9 648 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 C1QL2Q7Z5L3 287 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 PXT1Q8NFP0 134 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 ZNF665Q9H7R5 613 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 CNTD2Q9H8S5 307 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 NLKQ9UBE8 527 aa24.53■■□□□ 1.52
USP42-202ENST00000404008 SHISA3A0PJX4 238 aa24.52■■□□□ 1.52
USP42-202ENST00000404008 TNFRSF13BO14836 293 aaPredicted RBP24.52■■□□□ 1.52
USP42-202ENST00000404008 GYPAP02724 150 aa24.52■■□□□ 1.52
USP42-202ENST00000404008 STUMQ69YW2 141 aa24.52■■□□□ 1.52
USP42-202ENST00000404008 ASCL4Q6XD76 172 aa24.52■■□□□ 1.52
USP42-202ENST00000404008 GFI1Q99684 422 aa24.52■■□□□ 1.52
USP42-202ENST00000404008 UQCC2Q9BRT2 126 aa24.52■■□□□ 1.52
USP42-202ENST00000404008 TMUB1Q9BVT8 246 aa24.52■■□□□ 1.52
USP42-202ENST00000404008 RBFOX1Q9NWB1 397 aaKnown RBP24.52■■□□□ 1.52
USP42-202ENST00000404008 GSTK1Q9Y2Q3 226 aa24.52■■□□□ 1.52
USP42-202ENST00000404008 ABCA2Q9BZC7 2435 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 LOC100506127A0A0U1RQW1 187 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 SMAD7O15105 426 aaKnown RBP24.51■■□□□ 1.51
USP42-202ENST00000404008 CD37P11049 281 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 MYL9P24844 172 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 TIMM50Q3ZCQ8 353 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 GLT8D1Q68CQ7 371 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 OR5T2Q8NGG2 359 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 FOXRED1Q96CU9 486 aaPredicted RBP24.51■■□□□ 1.51
USP42-202ENST00000404008 PATZ1Q9HBE1 687 aaKnown RBP24.51■■□□□ 1.51
USP42-202ENST00000404008 RHOFQ9HBH0 211 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 PCDHB10Q9UN67 800 aa24.51■■□□□ 1.51
USP42-202ENST00000404008 OR2AT4A6NND4 320 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 F5H0A9 414 aaPredicted RBP24.5■■□□□ 1.51
USP42-202ENST00000404008 NDUFA2O43678 99 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 SFTPBP07988 381 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 LYPD2Q6UXB3 125 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 GDPGP1Q6ZNW5 385 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 OR4D6Q8NGJ1 314 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 ANGPTL6Q8NI99 470 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 EMG1Q92979 244 aaKnown RBP24.5■■□□□ 1.51
USP42-202ENST00000404008 RAB39BQ96DA2 213 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 CENPOQ9BU64 300 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 FUNDC2Q9BWH2 189 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 MIOXQ9UGB7 285 aa24.5■■□□□ 1.51
USP42-202ENST00000404008 AK6Q9Y3D8 172 aaKnown RBP24.5■■□□□ 1.51
USP42-202ENST00000404008 CDRT1O95170 752 aa24.49■■□□□ 1.51
USP42-202ENST00000404008 HEXAP06865 529 aa24.49■■□□□ 1.51
USP42-202ENST00000404008 PSG2P11465 335 aa24.49■■□□□ 1.51
USP42-202ENST00000404008 FAM58AQ8N1B3 248 aa24.49■■□□□ 1.51
USP42-202ENST00000404008 C18orf12Q96KH6 178 aa24.49■■□□□ 1.51
USP42-202ENST00000404008 MRPS28Q9Y2Q9 187 aaKnown RBP24.49■■□□□ 1.51
USP42-202ENST00000404008 IGKV1D-17A0A075B6S4 117 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 AIREO43918 545 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 WNT2P09544 360 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms