RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 CNTD2Q9H8S5 307 aa13.77□□□□□ -0.21
APTR-201ENST00000398043 MTCH1Q9NZJ7 389 aa13.77□□□□□ -0.21
APTR-201ENST00000398043 DIMT1Q9UNQ2 313 aaKnown RBP13.77□□□□□ -0.21
APTR-201ENST00000398043 SLC7A11Q9UPY5 501 aa13.77□□□□□ -0.21
APTR-201ENST00000398043 IGHV3OR16-10A0A075B7F0 116 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 NKX6-3A6NJ46 265 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 RFPL4AA6NLU0 287 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 RFPL4AL1F8VTS6 287 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 F8VVB4 439 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 F8VWA3 439 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 TOX4O94842 621 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 ATF1P18846 271 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 GTF2A1P52655 376 aaPredicted RBP13.76□□□□□ -0.21
APTR-201ENST00000398043 SMIM21Q3B7S5 101 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 SIGLECL1Q8N7X8 197 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.76□□□□□ -0.21
APTR-201ENST00000398043 ZNF485Q8NCK3 441 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 NRG4Q8WWG1 115 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 TFAP2CQ92754 450 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 PRDM13Q9H4Q3 707 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 SLC25A10Q9UBX3 287 aaPredicted RBP13.76□□□□□ -0.21
APTR-201ENST00000398043 CAB39Q9Y376 341 aaPredicted RBP13.76□□□□□ -0.21
APTR-201ENST00000398043 KPTNQ9Y664 436 aa13.76□□□□□ -0.21
APTR-201ENST00000398043 CENPVL3A0A0U1RRI6 287 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 TMEM212A6NML5 194 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 SERPINA3P01011 423 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 MT-ND2P03891 347 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 GABRA2P47869 451 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 ARF6P62330 175 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 SLC34A1Q06495 639 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 CNN3Q15417 329 aaKnown RBP13.75□□□□□ -0.21
APTR-201ENST00000398043 OR2G6Q5TZ20 316 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 RNF144BQ7Z419 303 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 KIR3DL3Q8N743 410 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 Q8N7P7 452 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 HAVCR2Q8TDQ0 301 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 FAM216AQ8WUB2 273 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 RGP1Q92546 391 aaPredicted RBP13.75□□□□□ -0.21
APTR-201ENST00000398043 GGHQ92820 318 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 PDCD1LG2Q9BQ51 273 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 PCGF1Q9BSM1 259 aa13.75□□□□□ -0.21
APTR-201ENST00000398043 ELL3Q9HB65 397 aaPredicted RBP13.75□□□□□ -0.21
APTR-201ENST00000398043 SIRT4Q9Y6E7 314 aaPredicted RBP13.75□□□□□ -0.21
APTR-201ENST00000398043 TENM1Q9UKZ4 2725 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 IRGMA1A4Y4 181 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 ALX3O95076 343 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 NXPH2O95156 264 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 CCDC159P0C7I6 412 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 PIPP12273 146 aaPredicted RBP13.74□□□□□ -0.21
APTR-201ENST00000398043 AZGP1P25311 298 aaKnown RBP13.74□□□□□ -0.21
APTR-201ENST00000398043 PRDX2P32119 198 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 CEBPDP49716 269 aaPredicted RBP13.74□□□□□ -0.21
APTR-201ENST00000398043 GBX2P52951 348 aaPredicted RBP13.74□□□□□ -0.21
APTR-201ENST00000398043 BPIFB3P59826 476 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 CCDC58Q4VC31 144 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 METTL11BQ5VVY1 283 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 SLC25A26Q70HW3 274 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 C8orf59Q8N0T1 100 aaPredicted RBP13.74□□□□□ -0.21
APTR-201ENST00000398043 BATF2Q8N1L9 274 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 ZNF561Q8N587 486 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 PARP16Q8N5Y8 322 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 ZNF676Q8N7Q3 588 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 OR13C3Q8NGS6 347 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 OR5AK2Q8NH90 309 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 BORCS8Q96FH0 119 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 CEP19Q96LK0 163 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 JMJD8Q96S16 334 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 MS4A7Q9GZW8 240 aaPredicted RBP13.74□□□□□ -0.21
APTR-201ENST00000398043 PLCXD1Q9NUJ7 323 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 CLEC2DQ9UHP7 191 aa13.74□□□□□ -0.21
APTR-201ENST00000398043 OGG1O15527 345 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 LALBAP00709 142 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 KNG1P01042 644 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 RPSAP08865 295 aaKnown RBP13.73□□□□□ -0.21
APTR-201ENST00000398043 ZNF20P17024 532 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 PRKACBP22694 351 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 RBP2P50120 134 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 UBA52P62987 128 aaKnown RBP13.73□□□□□ -0.21
APTR-201ENST00000398043 CDK5R1Q15078 307 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 PDCD1Q15116 288 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 ASPHD2Q6ICH7 369 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 ZNF529Q6P280 563 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 METAP1DQ6UB28 335 aaPredicted RBP13.73□□□□□ -0.21
APTR-201ENST00000398043 C1orf122Q6ZSJ8 110 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 TNFRSF14Q92956 283 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 SLAMF9Q96A28 289 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 SPSB1Q96BD6 273 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 TMEM80Q96HE8 168 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 SEBOXQ9HB31 216 aaPredicted RBP13.73□□□□□ -0.21
APTR-201ENST00000398043 FKBP14Q9NWM8 211 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 PSORS1C1Q9UIG5 152 aa13.73□□□□□ -0.21
APTR-201ENST00000398043 EXOSC1Q9Y3B2 195 aaKnown RBP13.73□□□□□ -0.21
APTR-201ENST00000398043 TRBV2A0A0J9YWF9 115 aa13.72□□□□□ -0.21
APTR-201ENST00000398043 MDFIC2A0A1B0GVS7 189 aa13.72□□□□□ -0.21
APTR-201ENST00000398043 H0YJX3 145 aa13.72□□□□□ -0.21
APTR-201ENST00000398043 TRIM77I1YAP6 450 aa13.72□□□□□ -0.21
APTR-201ENST00000398043 NPBWR2P48146 333 aa13.72□□□□□ -0.21
APTR-201ENST00000398043 ATP1B3P54709 279 aa13.72□□□□□ -0.21
APTR-201ENST00000398043 ST3GAL4Q11206 333 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms