RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 LUZP4Q9P127 313 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 FBXL17Q9UF56 701 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 ZDHHC8Q9ULC8 765 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 ANAPC10Q9UM13 185 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 CDC14CA4D256 554 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 OR5H15A6NDH6 313 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 OR5H1A6NKK0 313 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 ZNF587BE7ETH6 402 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 H7C1C5 153 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 K7EPK0 472 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 PPP1R2P9O14990 202 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 CRTAPO75718 401 aaPredicted RBP9.78□□□□□ -0.84
CUX1-204ENST00000393824 IGKV3-11P04433 115 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 CT45A8P0DMV1 189 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 CT45A9P0DMV2 189 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 FCGR2CP31995 323 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 ZNF84P51523 738 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 TMEM33P57088 247 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 LCN6P62502 163 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 QRFPP83859 136 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 SPOCK1Q08629 439 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 FUT7Q11130 342 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 CT45A2Q5DJT8 189 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 ZNF529Q6P280 563 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 SPNS3Q6ZMD2 512 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 FAM71E2Q8N5Q1 922 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 OR13D1Q8NGV5 346 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 OR4C3Q8NH37 302 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
CUX1-204ENST00000393824 ZNF721Q8TF20 911 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 SLC25A43Q8WUT9 341 aaPredicted RBP9.78□□□□□ -0.84
CUX1-204ENST00000393824 NKD1Q969G9 470 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 NTNG2Q96CW9 530 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 RTBDNQ9BSG5 229 aaPredicted RBP9.78□□□□□ -0.84
CUX1-204ENST00000393824 KCNIP3Q9Y2W7 256 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 MMACHCQ9Y4U1 282 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 APC2O95996 2303 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 A0A087WWC5 75 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 ADAM10O14672 748 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 SYT7O43581 403 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 CELA2AP08217 269 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 SOD3P08294 240 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 CEACAM1P13688 526 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 FPR2P25090 351 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 SLC37A1P57057 533 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 UNC119Q13432 240 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 OR8G1Q15617 311 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 UBE2V2Q15819 145 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 KHDC3LQ587J8 217 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 RPUSD3Q6P087 351 aaKnown RBP9.78□□□□□ -0.84
CUX1-204ENST00000393824 CLEC9AQ6UXN8 241 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 ANKRD37Q7Z713 158 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 OR5R1Q8NH85 324 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 RAB24Q969Q5 203 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 OR10A5Q9H207 317 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 HHLA2Q9UM44 414 aa9.78□□□□□ -0.84
CUX1-204ENST00000393824 PTPRBP23467 1997 aa9.77□□□□□ -0.84
CUX1-204ENST00000393824 CHD8Q9HCK8 2581 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 FIGNL2A6NMB9 653 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 NME2P1O60361 137 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 PTBP3O95758 552 aaKnown RBP9.77□□□□□ -0.85
CUX1-204ENST00000393824 ISG15P05161 165 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 RPS2P15880 293 aaKnown RBP9.77□□□□□ -0.85
CUX1-204ENST00000393824 CXCR1P25024 350 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 GALNSP34059 522 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 DNASE1L1P49184 302 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 S100A10P60903 97 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 EGR4Q05215 589 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 TNFRSF9Q07011 255 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 MFGE8Q08431 387 aaPredicted RBP9.77□□□□□ -0.85
CUX1-204ENST00000393824 ELOBQ15370 118 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 SLC35D2Q76EJ3 337 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 DCXRQ7Z4W1 244 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 C9orf40Q8IXQ3 194 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 APCDD1LQ8NCL9 501 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 PLPP5Q8NEB5 264 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 M1APQ8TC57 530 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 ST7LQ8TDW4 575 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 ZPBPQ9BS86 351 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 CNTD2Q9H8S5 307 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 GSKIPQ9P0R6 139 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 B9D1Q9UPM9 204 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 PTRH2Q9Y3E5 179 aaKnown RBP9.77□□□□□ -0.85
CUX1-204ENST00000393824 IGF2RP11717 2491 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 ZNF726A6NNF4 738 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 CRYABP02511 175 aaKnown RBP9.77□□□□□ -0.85
CUX1-204ENST00000393824 GNB3P16520 340 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 SPINK2P20155 84 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 CHATP28329 748 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 NPY4RP50391 375 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 EMP2P54851 167 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 ZNF616Q08AN1 781 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 SRSF6Q13247 344 aaKnown RBP9.77□□□□□ -0.85
CUX1-204ENST00000393824 SOHLH1Q5JUK2 328 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 LHFPL1Q86WI0 220 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 FAM219AQ8IW50 185 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 LFNGQ8NES3 379 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 CT55Q8WUE5 264 aa9.77□□□□□ -0.85
CUX1-204ENST00000393824 DDA1Q9BW61 102 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms