RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 TSEN15Q8WW01 171 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C10orf82Q8WW14 230 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C1orf54Q8WWF1 131 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 GEMIN6Q8WXD5 167 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C22orf15Q8WYQ4 148 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SLC38A4Q969I6 547 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C12orf43Q96C57 262 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 DNAJC19Q96DA6 116 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ASB9Q96DX5 294 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CCDC126Q96EE4 140 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SMIM10Q96HG1 83 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C14orf144Q96I85 54 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SERPINI1Q99574 410 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF2Q9BSG1 426 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 HDHD3Q9BSH5 251 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 MED18Q9BUE0 208 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 GABARAPL3Q9BY60 117 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 PARD6GQ9BYG4 376 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ANKRD60Q9BZ19 345 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SLC25A39Q9BZJ4 359 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 TM6SF2Q9BZW4 377 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 MIXL1Q9H2W2 232 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 CDC42EP4Q9H3Q1 356 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ASB7Q9H672 318 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ARMC7Q9H6L4 198 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ANKRA2Q9H9E1 313 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 FGF20Q9NP95 211 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 BIN3Q9NQY0 253 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ZC4H2Q9NQZ6 224 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 LYARQ9NX58 379 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 GCNT4Q9P109 453 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 MYEF2Q9P2K5 600 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 PCYOX1Q9UHG3 505 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF229Q9UJW7 825 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 OR52A1Q9UKL2 312 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 FBXO5Q9UKT4 447 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SNX12Q9UMY4 172 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF337Q9Y3M9 751 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 HYOU1Q9Y4L1 999 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 WSB1Q9Y6I7 421 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C4AP0C0L4 1744 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 C4BP0C0L5 1744 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 QSER1Q2KHR3 1735 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 NUP188Q5SRE5 1749 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 XRN1Q8IZH2 1706 aaKnown RBP2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ABCA3Q99758 1704 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 NWD2Q9ULI1 1742 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 LMO7Q8WWI1 1683 aa2.02□□□□□ -2.09
PTPRC-205ENST00000391970 ARHGAP5Q13017 1502 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 A2ML1A8K2U0 1454 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 MRC1P22897 1456 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 ANKRD31Q8N7Z5 1873 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 LAMA4Q16363 1823 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PKD1L3Q7Z443 1732 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TRAV39A0A0B4J263 110 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TRBV11-1A0A0K0K1C0 115 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SLC5A10A0PJK1 596 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PLAC8L1A1L4L8 177 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SMCO3A2RU48 225 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PRSS37A4D1T9 235 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TMEM238C9JI98 176 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 LRRN3E7EW58 273 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 F6UB75 175 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 DLEU1O43261 78 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 CALUO43852 315 aaPredicted RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 HUS1O60921 280 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SS18L1O75177 396 aaPredicted RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 MED6O75586 246 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SNAPC5O75971 98 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 OR2J3O76001 311 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 KCNK2O95069 426 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 H6PDO95479 791 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 FTH1P02794 183 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 BGLAPP02818 100 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SHBGP04278 402 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 ACSM4P0C7M7 580 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PSKH1P11801 424 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 AZU1P20160 251 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 OGNP20774 298 aaKnown RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 DTYMKP23919 212 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 NAA10P41227 235 aaPredicted RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 P2RY2P41231 377 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 CDKN2CP42773 168 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 CXCL5P42830 114 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 CAPZBP47756 277 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 CCR6P51684 374 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 XKP51811 444 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 OR2B6P58173 313 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PSME3P61289 254 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 COPZ1P61923 177 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PSPHP78330 225 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 DCDP81605 110 aaKnown RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 GTF2BQ00403 316 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 IFITM3Q01628 133 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TNFRSF9Q07011 255 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 ECH1Q13011 328 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SLAMF1Q13291 335 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TFDP2Q14188 446 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 IRF4Q15306 451 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms