RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TMEM212A6NML5 194 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 SLC1A7O00341 560 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 DVL1O14640 695 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 INMTO95050 263 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 CCDC159P0C7I6 412 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 PGA5P0DJD9 388 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 ATF1P18846 271 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 MRPL28Q13084 256 aaKnown RBP12.54□□□□□ -0.4
SS18L1-202ENST00000370848 IKZF1Q13422 519 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 C6orf141Q5SZD1 244 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 TMPRSS11AQ6ZMR5 421 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF573Q86YE8 665 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 POC1AQ8NBT0 407 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 OR13C5Q8NGS8 318 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 OR13C9Q8NGT0 318 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 OR5AK2Q8NH90 309 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 ANGPTL6Q8NI99 470 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 RPS4Y2Q8TD47 263 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 C10orf35Q96D05 121 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 GAFA1Q96PS6 74 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
SS18L1-202ENST00000370848 MRI1Q9BV20 369 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 PAK1IP1Q9NWT1 392 aaPredicted RBP12.54□□□□□ -0.4
SS18L1-202ENST00000370848 SLC7A11Q9UPY5 501 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 PCDHGB5Q9Y5G0 923 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 IGKV1D-17A0A075B6S4 117 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 F8VVB4 439 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 F8VWA3 439 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 NDUFA2O43678 99 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 MYF6P23409 242 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 MPZP25189 248 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 AZGP1P25311 298 aaKnown RBP12.53□□□□□ -0.4
SS18L1-202ENST00000370848 SOX2P48431 317 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 CEBPDP49716 269 aaPredicted RBP12.53□□□□□ -0.4
SS18L1-202ENST00000370848 RIPK1Q13546 671 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 ASPHD2Q6ICH7 369 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
SS18L1-202ENST00000370848 ACP7Q6ZNF0 438 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 EGFL6Q8IUX8 553 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 STX19Q8N4C7 294 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 OR52N1Q8NH53 320 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF671Q8TAW3 534 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 TSEN15Q8WW01 171 aaKnown RBP12.53□□□□□ -0.4
SS18L1-202ENST00000370848 RAB40AQ8WXH6 277 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 C22orf15Q8WYQ4 148 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 PP6455Q8WZ26 134 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 ST8SIA4Q92187 359 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 SLAMF9Q96A28 289 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 RFT1Q96AA3 541 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 TMIGD2Q96BF3 282 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 C12orf43Q96C57 262 aaKnown RBP12.53□□□□□ -0.4
SS18L1-202ENST00000370848 BORCS8Q96FH0 119 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 SPACA5Q96QH8 159 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 NRIP2Q9BQI9 281 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 NUDT16L1Q9BRJ7 211 aaKnown RBP12.53□□□□□ -0.4
SS18L1-202ENST00000370848 ANKRD60Q9BZ19 345 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 COMMD4Q9H0A8 199 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 BABAM2Q9NXR7 383 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 KAAG1Q9UBP8 84 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF222Q9UK12 451 aa12.53□□□□□ -0.4
SS18L1-202ENST00000370848 PNMA8CA0A1B0GUJ8 204 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 OR2AT4A6NND4 320 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 POM121CA8CG34 1229 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 SERPINA3P01011 423 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 PSG2P11465 335 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 GABRA2P47869 451 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 POU3F4P49335 361 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 FUT6P51993 359 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 CNN3Q15417 329 aaKnown RBP12.52□□□□□ -0.41
SS18L1-202ENST00000370848 DGUOKQ16854 277 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 RPL22L1Q6P5R6 122 aaKnown RBP12.52□□□□□ -0.41
SS18L1-202ENST00000370848 CRIP3Q6Q6R5 217 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 ZNF788Q6ZQV5 615 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 UTS2BQ765I0 119 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 ORAI1Q96D31 301 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 PKIBQ9C010 78 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 VCX3BQ9H321 246 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 ELL3Q9HB65 397 aaPredicted RBP12.52□□□□□ -0.41
SS18L1-202ENST00000370848 CHCHD3Q9NX63 227 aaKnown RBP12.52□□□□□ -0.41
SS18L1-202ENST00000370848 MTCH1Q9NZJ7 389 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 DHDHQ9UQ10 334 aa12.52□□□□□ -0.41
SS18L1-202ENST00000370848 DOCK11Q5JSL3 2073 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 IGHV3OR16-10A0A075B7F0 116 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 KIR2DS1A0A191URI9 304 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 NKX6-3A6NJ46 265 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 PTGES3LE9PB15 166 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 OGG1O15527 345 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 CDK1P06493 297 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 NPY4RP50391 375 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 ERVK11-1P61568 191 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 IL13RA1P78552 427 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 IL24Q13007 206 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 CCDC58Q4VC31 144 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 ATPAF1Q5TC12 328 aaPredicted RBP12.51□□□□□ -0.41
SS18L1-202ENST00000370848 DMKNQ6E0U4 476 aaPredicted RBP12.51□□□□□ -0.41
SS18L1-202ENST00000370848 SLC25A26Q70HW3 274 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 BTN2A1Q7KYR7 527 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 SLC36A1Q7Z2H8 476 aa12.51□□□□□ -0.41
SS18L1-202ENST00000370848 BCL6BQ8N143 479 aaPredicted RBP12.51□□□□□ -0.41
SS18L1-202ENST00000370848 CD177Q8N6Q3 437 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms