RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SOX2P48431 317 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 DUX4L9Q6RFH8 374 aaPredicted RBP12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 UTS2BQ765I0 119 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 GLCCI1Q86VQ1 547 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 ZNF573Q86YE8 665 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR13C9Q8NGT0 318 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 PGLYRP3Q96LB9 341 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 DUX4Q9UBX2 424 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 SLC7A11Q9UPY5 501 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 DHDHQ9UQ10 334 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 SONP18583 2426 aaKnown RBP12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 J3QT63 122 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 SLC22A1O15245 554 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 FCN3O75636 299 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 SERPINA3P01011 423 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 AZGP1P25311 298 aaKnown RBP12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 PSMA1P25786 263 aaKnown RBP12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 FUT6P51993 359 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 CNN3Q15417 329 aaKnown RBP12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 ASPHD2Q6ICH7 369 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 ZNF841Q6ZN19 808 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR5T2Q8NGG2 359 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 GHSRQ92847 366 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 STUB1Q9UNE7 303 aa12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 SETD2Q9BYW2 2564 aaPredicted RBP12.57□□□□□ -0.4
SMPDL3A-201ENST00000368440 A8MXK9 166 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 ADAM20O43506 726 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 PLATP00750 562 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 HOXB4P17483 251 aaPredicted RBP12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 AMY2BP19961 511 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 GLRA1P23415 457 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 MPZP25189 248 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 PITPNBP48739 271 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 RPS11P62280 158 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 TPBGQ13641 420 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 INSL4Q14641 139 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 MICBQ29980 383 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 CR1LQ2VPA4 569 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 ESCO2Q56NI9 601 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 PARP16Q8N5Y8 322 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR8B3Q8NGG8 313 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 GPR148Q8TDV2 347 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 ORAI1Q96D31 301 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 BORCS8Q96FH0 119 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 TECTBQ96PL2 329 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 SPACA5Q96QH8 159 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR8B2Q96RD0 313 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 DCSTAMPQ9H295 470 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 SMURF1Q9HCE7 757 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 ISYNA1Q9NPH2 558 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 MMP26Q9NRE1 261 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 SSR3Q9UNL2 185 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 ZNF281Q9Y2X9 895 aa12.56□□□□□ -0.4
SMPDL3A-201ENST00000368440 TRAV20A0A0B4J274 112 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 TRAPPC2LH3BP13 241 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 FOXH1O75593 365 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 PGA5P0DJD9 388 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 MUC1P15941 1255 aaPredicted RBP12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 SERPINB10P48595 397 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 TIMM50Q3ZCQ8 353 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 FAM120AOSQ5T036 256 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 STUMQ69YW2 141 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 C22orf42Q6IC83 251 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 CRIP3Q6Q6R5 217 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 POC1AQ8NBT0 407 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 ZNF671Q8TAW3 534 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 RFT1Q96AA3 541 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 CCL13Q99616 98 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 SSBP3Q9BWW4 388 aaPredicted RBP12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 ZCCHC4Q9H5U6 513 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 TMEM160Q9NX00 188 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 DNAJB11Q9UBS4 358 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 ZFHX3Q15911 3703 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 VGLL3A8MV65 326 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 CRLF1O75462 422 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 TAS2R43P59537 309 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 GNB2P62879 340 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 FABP5Q01469 135 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 KCNJ8Q15842 424 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 WDR25Q64LD2 544 aaPredicted RBP12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 NLRC3Q7RTR2 1065 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 SERPINA12Q8IW75 414 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 FAM216BQ8N7L0 139 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 DNAAF1Q8NEP3 725 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR51A2Q8NGJ7 313 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 BCL7BQ9BQE9 202 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 PKIBQ9C010 78 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 TAS2R4Q9NYW5 299 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 NLKQ9UBE8 527 aa12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 SF3B6Q9Y3B4 125 aaKnown RBP12.55□□□□□ -0.4
SMPDL3A-201ENST00000368440 TRBV5-5A0A0J9YX44 114 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 F8VVB4 439 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 F8VWA3 439 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 TMPRSS2O15393 492 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 OCM2P0CE71 109 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 SELLP14151 372 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 GABRA5P31644 462 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms