RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SLC25A22Q9H936 323 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 DAZ3Q9NR90 486 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC88AQ3V6T2 1871 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 OVOS2A0A0J9YW53 1432 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 OVOS2Q6IE36 1432 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 A0A0J9YXV3 536 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 KIR2DS1A0A191URI9 304 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 FAM240AA0A1B0GVK7 77 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF233A6NK53 670 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ZMPSTE24O75844 475 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ASS1P00966 412 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 BCHEP06276 602 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ATF6P18850 670 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ZBTB25P24278 435 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 HLA-DMAP28067 261 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 KCNJ3P48549 501 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 DNASE1L1P49184 302 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 GNGT1P63211 74 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PRR3P79522 188 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 MRPS15P82914 257 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 KIR2DS1Q14954 304 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PON2Q15165 354 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 OR1Q1Q15612 314 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 WDR82Q6UXN9 313 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 MAPK1IP1LQ8NDC0 245 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 OR52P1PQ8NH57 321 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM239Q8WW34 195 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM230Q96A57 120 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 C18orf15Q96N68 181 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ZFP3Q96NJ6 502 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 KCTD14Q9BQ13 255 aaPredicted RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 TSGA10Q9BZW7 698 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 MED4Q9NPJ6 270 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 RGS18Q9NS28 235 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PUS1Q9Y606 427 aaKnown RBP eCLIP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ANKRD12Q6UB98 2062 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 RALGAPA2Q2PPJ7 1873 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 COL4A2P08572 1712 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 IQGAP2Q13576 1575 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 INO80Q9ULG1 1556 aaPredicted RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 SYCP2Q9BX26 1530 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CEP162Q5TB80 1403 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ASTN1O14525 1302 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 FAM168BA1KXE4 195 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PLAC8L1A1L4L8 177 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 NDUFC2-KCTD14E9PQ53 114 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ITGB1BP1O14713 200 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 RETP07949 1114 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 POLR2IP36954 125 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 STX4Q12846 297 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ARFRP1Q13795 201 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 MRGPRG-AS1Q2M3A8 158 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PGGHGQ32M88 737 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CASP12Q6UXS9 341 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 RNF165Q6ZSG1 346 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 GDPD3Q7L5L3 318 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 NKAIN4Q8IVV8 208 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 IFT20Q8IY31 132 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 GAPTQ8N292 157 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CBR4Q8N4T8 237 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 C2orf73Q8N5S3 287 aaPredicted RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 OR6N2Q8NGY6 317 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 OR2G3Q8NGZ4 309 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 DNAJC1Q96KC8 554 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 FAM210AQ96ND0 272 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 OR52A5Q9H2C5 316 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PANK3Q9H999 370 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 RBAKQ9NYW8 714 aaPredicted RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 GUCA1BQ9UMX6 200 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ASF1AQ9Y294 204 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 LMTK2Q8IWU2 1503 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 NOS1P29475 1434 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 N4BP2Q86UW6 1770 aaPredicted RBP1.15□□□□□ -2.22
BRCA1-202ENST00000354071 A0A0G2JN53 185 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 A0A0U1RQV1 116 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 ANKRD20A5PA0PJZ0 165 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 F8VP50 259 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 RNASEK-C17orf49H0YIS7 233 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 ATP8B1O43520 1251 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 CDKN2DP55273 166 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 GTF3C1Q12789 2109 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 TFDP2Q14188 446 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 VAMP3Q15836 100 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 HHATQ5VTY9 493 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 KHDRBS2Q5VWX1 349 aaKnown RBP1.15□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM236Q5W0B7 351 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 TEX43Q6ZNM6 134 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 PLCZ1Q86YW0 608 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.15□□□□□ -2.22
BRCA1-202ENST00000354071 CHST4Q8NCG5 386 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 OR11H7Q8NGC8 314 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 OR2Y1Q8NGV0 311 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 ING5Q8WYH8 240 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC127Q96BQ5 260 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC42Q96M95 316 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 TIMM29Q9BSF4 260 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 OR11A1Q9GZK7 315 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 POMKQ9H5K3 350 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 PARVGQ9HBI0 331 aa1.15□□□□□ -2.22
BRCA1-202ENST00000354071 BATF3Q9NR55 127 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms